RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 NRF1Q16656 503 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 IRGCQ6NXR0 463 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 GRASPQ7Z6J2 395 aaPredicted RBP22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 ADGRG6Q86SQ4 1221 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 VRK3Q8IV63 474 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 CPXM2Q8N436 756 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 STON2Q8WXE9 905 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 FOXJ1Q92949 421 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 SLCO4A1Q96BD0 722 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 LRRC3BQ96PB8 259 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 ZDHHC4Q9NPG8 344 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 SDR39U1Q9NRG7 319 aaPredicted RBP22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 ASB3Q9Y575 518 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 SPEGQ15772 3267 aa22.76■■□□□ 1.23
CLPTM1-201ENST00000337392 STX16O14662 325 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 ATP6V1B2P21281 511 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 SPAM1P38567 509 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 RPS6KA3P51812 740 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 HSPA14Q0VDF9 509 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 GTF2H2Q13888 395 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 GTF2H2CQ6P1K8 395 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 NXPE1Q8N323 547 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 ASB9Q96DX5 294 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 DCUN1D1Q96GG9 259 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 TMEM181Q9P2C4 612 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 ZNHIT2Q9UHR6 403 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 DTNAQ9Y4J8 743 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 NUP214P35658 2090 aaPredicted RBP22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 GIPC1O14908 333 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 ANGPT2O15123 496 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 TPST1O60507 370 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 RSL1D1O76021 490 aaKnown RBP22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 HMGCS1Q01581 520 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 C6orf136Q5SQH8 315 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 PYCR2Q96C36 320 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 LRGUKQ96M69 825 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 INTS7Q9NVH2 962 aaKnown RBP22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 CD300AQ9UGN4 299 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 V9GYQ6 96 aa22.75■■□□□ 1.23
CLPTM1-201ENST00000337392 A6NHS1 94 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 SYNCRIPO60506 623 aaKnown RBP22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 LYNP07948 512 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 UROSP10746 265 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 GRIA3P42263 894 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 METAP1P53582 386 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 ADARP55265 1226 aaKnown RBP22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 SNRPD1P62314 119 aaKnown RBP22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 MAPRE2Q15555 327 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 ZXDCQ2QGD7 858 aaPredicted RBP22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 CMPK2Q5EBM0 449 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 TCEAL5Q5H9L2 206 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 STK40Q8N2I9 435 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 SPDYE1Q8NFV5 336 aaPredicted RBP22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 ASB2Q96Q27 587 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 TMEM79Q9BSE2 394 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 BRD9Q9H8M2 597 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 SLC52A3Q9NQ40 469 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 CMTM6Q9NX76 183 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 GNPTGQ9UJJ9 305 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 CROCCQ5TZA2 2017 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 C1SP09871 688 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 NCK1P16333 377 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 ARHGEF7Q14155 803 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 XKR7Q5GH72 579 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 CAPRIN2Q6IMN6 1127 aaKnown RBP22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 CCDC149Q6ZUS6 474 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 ADIPOR2Q86V24 386 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 ZBTB2Q8N680 514 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 TDP1Q9NUW8 608 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 NDUFAF1Q9Y375 327 aa22.74■■□□□ 1.23
CLPTM1-201ENST00000337392 TTC36A6NLP5 189 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 MTHFD1P11586 935 aaKnown RBP22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 CCR7P32248 378 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 DGKQP52824 942 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 RBBP5Q15291 538 aaKnown RBP22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 TLR1Q15399 786 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 RFTN2Q52LD8 501 aaPredicted RBP22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 OGFRL1Q5TC84 451 aaPredicted RBP22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 C8orf82Q6P1X6 216 aaPredicted RBP22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 SLC15A3Q8IY34 581 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 MYO1HQ8N1T3 1032 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 PBXIP1Q96AQ6 731 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 SCRN2Q96FV2 425 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 FAM210AQ96ND0 272 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 BATF3Q9NR55 127 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 PABPC1P11940 636 aaKnown RBP22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 VCLP18206 1134 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 CDKL1Q00532 357 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 BOP1Q14137 746 aaKnown RBP22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 ADGRE1Q14246 886 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 GPRC6AQ5T6X5 926 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 SLC2A7Q6PXP3 512 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 SPPL2CQ8IUH8 684 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 C12orf76Q8N812 135 aaPredicted RBP22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 MRPL43Q8N983 215 aaKnown RBP22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 ZFYVE19Q96K21 471 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 IL23AQ9NPF7 189 aa22.73■■□□□ 1.23
CLPTM1-201ENST00000337392 RNF11Q9Y3C5 154 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms