RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ITPKAP23677 461 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 METAP1P53582 386 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 KCNK10P57789 538 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 MYBPC1Q00872 1141 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 CACNG1Q06432 222 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 GTF2H2Q13888 395 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 RAB33AQ14088 237 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 TEAD2Q15562 447 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 PYCR3Q53H96 274 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 TBCELQ5QJ74 424 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 C6orf136Q5SQH8 315 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 GTF2H2CQ6P1K8 395 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 NKAPQ8N5F7 415 aaKnown RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 LRRC58Q96CX6 371 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 ANKRD27Q96NW4 1050 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 TRMOQ9BU70 441 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 C2orf49Q9BVC5 232 aaPredicted RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 BBS2Q9BXC9 721 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 ATG10Q9H0Y0 220 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 TMEM181Q9P2C4 612 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 ITM2BQ9Y287 266 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 ARIH1Q9Y4X5 557 aaPredicted RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 GPR45Q9Y5Y3 372 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 GBF1Q92538 1859 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 TRANK1O15050 2925 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 CCDC154A6NI56 674 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 PBLDP30039 288 aaPredicted RBP8.71□□□□□ -1.01
SNCA-201ENST00000336904 AKT1P31749 480 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 FOXD4Q12950 439 aaPredicted RBP8.71□□□□□ -1.01
SNCA-201ENST00000336904 MAPRE2Q15555 327 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 CYP51A1Q16850 503 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 SLC5A9Q2M3M2 681 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 AP5B1Q2VPB7 878 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 CNKSR3Q6P9H4 555 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 KLHDC10Q6PID8 442 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 CRTC1Q6UUV9 634 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 UGT2A3Q6UWM9 527 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 OFCC1Q8IZS5 231 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 OR56A4Q8NGH8 313 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 ZNF483Q8TF39 744 aaPredicted RBP8.71□□□□□ -1.01
SNCA-201ENST00000336904 KCNJ9Q92806 393 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 ZFYVE19Q96K21 471 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 PHF12Q96QT6 1004 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 P2RY12Q9H244 342 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 LTB4R2Q9NPC1 389 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 CD300AQ9UGN4 299 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 LSM7Q9UK45 103 aaKnown RBP8.71□□□□□ -1.01
SNCA-201ENST00000336904 UTS2RQ9UKP6 389 aa8.71□□□□□ -1.01
SNCA-201ENST00000336904 TMEM202A6NGA9 273 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 SYCE1LA8MT33 242 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 ARPC2O15144 300 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 DNAJB1P25685 340 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 HMOX2P30519 316 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 PTGER3P43115 390 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 ZFP36L2P47974 494 aaKnown RBP8.71□□□□□ -1.02
SNCA-201ENST00000336904 GSK3BP49841 420 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 OR4D2P58180 307 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 ATP6V0D1P61421 351 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 DDX39BQ13838 428 aaKnown RBP8.71□□□□□ -1.02
SNCA-201ENST00000336904 RFTN1Q14699 578 aaPredicted RBP8.71□□□□□ -1.02
SNCA-201ENST00000336904 ATP6AP1LQ52LC2 224 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 RETSATQ6NUM9 610 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 Q6ZNB5 142 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 GALNT7Q86SF2 657 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 ADGRG6Q86SQ4 1221 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 TRIM74Q86UV6 250 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 DCAF4L2Q8NA75 395 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 PROKR1Q8TCW9 393 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 ZSWIM3Q96MP5 696 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 TCF25Q9BQ70 676 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 CERS4Q9HA82 394 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 SDR39U1Q9NRG7 319 aaPredicted RBP8.71□□□□□ -1.02
SNCA-201ENST00000336904 C6orf203Q9P0P8 240 aaPredicted RBP8.71□□□□□ -1.02
SNCA-201ENST00000336904 TBX21Q9UL17 535 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 NOTCH4Q99466 2003 aa8.71□□□□□ -1.02
SNCA-201ENST00000336904 KANSL1LA0AUZ9 987 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 LOC730098B7Z3J9 87 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 CASQ2O14958 399 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 SLC22A3O75751 556 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 CHEK2O96017 543 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 MYOGP15173 224 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 POLR2JP52435 117 aaKnown RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 CHN2P52757 468 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 IST1P53990 364 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 B4GALNT1Q00973 533 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 LIPEQ05469 1076 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 LAPTM5Q13571 262 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ZXDCQ2QGD7 858 aaPredicted RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 SAMD4BQ5PRF9 694 aaKnown RBP8.7□□□□□ -1.02
SNCA-201ENST00000336904 TPGS2Q68CL5 300 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ANKRD34AQ69YU3 496 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 ADNP2Q6IQ32 1131 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 BLOC1S3Q6QNY0 202 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 GALNT10Q86SR1 603 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 SFTPA1Q8IWL2 248 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 PHACTR4Q8IZ21 702 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 CBR4Q8N4T8 237 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 PCYOX1LQ8NBM8 494 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 KREMEN2Q8NCW0 462 aa8.7□□□□□ -1.02
SNCA-201ENST00000336904 TMEM79Q9BSE2 394 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms