RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 PIWIL4Q7Z3Z4 852 aaKnown RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 GALNT7Q86SF2 657 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 LMNTD2Q8IXW0 634 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 KLC4Q9NSK0 619 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 PCMTD2Q9NV79 361 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 SCHIP1Q9P0W5 487 aaPredicted RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 CASC3O15234 703 aaKnown RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 ESR1P03372 595 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 HK3P52790 923 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 IRX4P78413 519 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 CTBSQ01459 385 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 HSPA14Q0VDF9 509 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 ZKSCAN8Q15776 578 aaPredicted RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 RNF187Q5TA31 235 aaPredicted RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 DUS1LQ6P1R4 473 aaKnown RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 TDRPQ86YL5 185 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 SYT12Q8IV01 421 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 EEF1AKMT1Q8WVE0 214 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 ELMO1Q92556 727 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 SCARF2Q96GP6 870 aaPredicted RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 LRRC61Q9BV99 259 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 TMEM109Q9BVC6 243 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 GNPTGQ9UJJ9 305 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 IKBKGQ9Y6K9 419 aa16.22■□□□□ 0.19
SHOX-201ENST00000334060 ZFHX2Q9C0A1 2572 aaPredicted RBP16.22■□□□□ 0.19
SHOX-201ENST00000334060 PCDH15Q96QU1 1955 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 EP300Q09472 2414 aaPredicted RBP16.21■□□□□ 0.19
SHOX-201ENST00000334060 OTOGLQ3ZCN5 2332 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 TRBV23OR9-2A0A075B6M9 112 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 VILLO15195 856 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 VEGFDO43915 354 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 CDH16O75309 829 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 SPAG7O75391 227 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 PYGBP11216 843 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 MYF5P13349 255 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 ADARP55265 1226 aaKnown RBP16.21■□□□□ 0.19
SHOX-201ENST00000334060 YPEL5P62699 121 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 GRIK2Q13002 908 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 NAB1Q13506 487 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 BCL7AQ4VC05 210 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 ZC3H14Q6PJT7 736 aaKnown RBP16.21■□□□□ 0.19
SHOX-201ENST00000334060 SLC30A9Q6PML9 568 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 LRIG3Q6UXM1 1119 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 LRRTM4Q86VH4 590 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 SRRM1Q8IYB3 904 aaKnown RBP16.21■□□□□ 0.19
SHOX-201ENST00000334060 CFAP206Q8IYR0 622 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 PHACTR4Q8IZ21 702 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 CENPLQ8N0S6 344 aaPredicted RBP16.21■□□□□ 0.19
SHOX-201ENST00000334060 KCTD4Q8WVF5 259 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 TMBIM4Q9HC24 238 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 PRDM8Q9NQV8 689 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 KCTD5Q9NXV2 234 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 LGALS13Q9UHV8 139 aa16.21■□□□□ 0.19
SHOX-201ENST00000334060 A0A1B0GTW7 788 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 E5RI56 91 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 C2P06681 752 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 SNRPAP09012 282 aaKnown RBP16.2■□□□□ 0.18
SHOX-201ENST00000334060 KRT15P19012 456 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 AOAHP28039 575 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 CNR2P34972 360 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 MPLP40238 635 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 CTSKP43235 329 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 MAGEA12P43365 314 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 INSCQ1MX18 579 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 TRIM61Q5EBN2 209 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 PRRT3Q5FWE3 981 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 TNFAIP8L3Q5GJ75 292 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 LYPLAL1Q5VWZ2 237 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 PEAR1Q5VY43 1037 aaPredicted RBP16.2■□□□□ 0.18
SHOX-201ENST00000334060 FAM219BQ5XKK7 198 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 TRABD2AQ86V40 505 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 PACS2Q86VP3 889 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 PARGQ86W56 976 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 GALNT13Q8IUC8 556 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 KCNJ9Q92806 393 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 CCDC77Q9BR77 488 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 VPS11Q9H270 941 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 OSGEPL1Q9H4B0 414 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 NSMCE4AQ9NXX6 385 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 FETUBQ9UGM5 382 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 CABIN1Q9Y6J0 2220 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 PRR19A6NJB7 356 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 CFAP99D6REC4 459 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 SNX2O60749 519 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 PYGLP06737 847 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 HOXC4P09017 264 aaPredicted RBP16.2■□□□□ 0.18
SHOX-201ENST00000334060 OR56A5P0C7T3 313 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 BRAFP15056 766 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 JUNDP17535 347 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 HTR1BP28222 390 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 GLRBP48167 497 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 KCNC1P48547 511 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 MPP2Q14168 576 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 SF3A2Q15428 464 aaKnown RBP16.2■□□□□ 0.18
SHOX-201ENST00000334060 FAM45BPQ6NSW5 357 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 C16orf46Q6P387 395 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 EXOC3L1Q86VI1 746 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 GATAD2AQ86YP4 633 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 FAM45AQ8TCE6 357 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 DLG3Q92796 817 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms