RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 FBXO5Q9UKT4 447 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 PDE4DIPQ5VU43 2346 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 SMIM28A0A1B0GU29 152 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 OR51F1A6NGY5 319 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 I6L893 689 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 YES1P07947 543 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 CPB1P15086 417 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 ABATP80404 500 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 SNTA1Q13424 505 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 NFYCQ13952 458 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 HIST2H2ACQ16777 129 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 RABL3Q5HYI8 236 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 CYS1Q717R9 158 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 MIER2Q8N344 545 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 OR6Q1Q8NGQ2 317 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 STYXQ8WUJ0 223 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 TUBGCP3Q96CW5 907 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 PABPC5Q96DU9 382 aaKnown RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 ZNF408Q9H9D4 720 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 CASS4Q9NQ75 786 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 TMEM39AQ9NV64 488 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 RBM22Q9NW64 420 aaKnown RBP eCLIP11.73□□□□□ -0.532e-8■■■■□ 25.8
LIMK2-202ENST00000333611 UBQLN1Q9UMX0 589 aaKnown RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 LRRC14BA6NHZ5 514 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 EFCAB9A8MZ26 197 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 SOCS7O14512 581 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 SIX3O95343 332 aaPredicted RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 PIRTP0C851 137 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 THRBP10828 461 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 ATN1P54259 1190 aaPredicted RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 ZNF280AP59817 542 aaPredicted RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 GPR68Q15743 365 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 CYBRD1Q53TN4 286 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 CLVS2Q5SYC1 327 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 SLC27A1Q6PCB7 646 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 TBPL2Q6SJ96 375 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 TFAP2DQ7Z6R9 452 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 PIM3Q86V86 326 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 CNTD1Q8N815 330 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 ZNF540Q8NDQ6 660 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 OR13J1Q8NGT2 312 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 CENPIQ92674 756 aaPredicted RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 TBL1YQ9BQ87 522 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 ZBTB20Q9HC78 741 aaPredicted RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 ERVK-18Q9QC07 812 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 SUCOQ9UBS9 1254 aaKnown RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 IPO11Q9UI26 975 aaKnown RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 ORC6Q9Y5N6 252 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 CIB4A0PJX0 185 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 SLCO1B7G3V0H7 640 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 PPP6CO00743 305 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 PLD2O14939 933 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 GSTA4O15217 222 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 SCO2O43819 266 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 USP2O75604 605 aaPredicted RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 SOAT2O75908 522 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 CD36P16671 472 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 NPY2RP49146 381 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 BTN1A1Q13410 526 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 FSCN1Q16658 493 aaKnown RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 UGP2Q16851 508 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 GDPD3Q7L5L3 318 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 NRARPQ7Z6K4 114 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 CLEC14AQ86T13 490 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 UNC93AQ86WB7 457 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 MFSD6LQ8IWD5 586 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 FAM9CQ8IZT9 166 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 SVOPQ8N4V2 548 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 DNAJB3Q8WWF6 145 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 TMEM74Q96NL1 305 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 OSBPL2Q9H1P3 480 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 TIGARQ9NQ88 270 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 MRPL39Q9NYK5 338 aaKnown RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 USP22Q9UPT9 525 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 MGAMO43451 1857 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 SLC12A8A0AV02 714 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 MYO1GB0I1T2 1018 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 DCLK1O15075 740 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 ATP5F1P24539 256 aaPredicted RBP11.72□□□□□ -0.53
LIMK2-202ENST00000333611 DSTNP60981 165 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 GPR158Q5T848 1215 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 NOTUMQ6P988 496 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 PAMR1Q6UXH9 720 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 ERO1BQ86YB8 467 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 CHCHD6Q9BRQ6 235 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 QPCTLQ9NXS2 382 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 MPP6Q9NZW5 540 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 COMMD10Q9Y6G5 202 aa11.72□□□□□ -0.53
LIMK2-202ENST00000333611 MYBPHLA2RUH7 354 aa11.71□□□□□ -0.53
LIMK2-202ENST00000333611 CCDC154A6NI56 674 aa11.71□□□□□ -0.53
LIMK2-202ENST00000333611 ERI2A8K979 691 aaKnown RBP11.71□□□□□ -0.53
LIMK2-202ENST00000333611 RGS13O14921 159 aa11.71□□□□□ -0.53
LIMK2-202ENST00000333611 TRIM24O15164 1050 aa11.71□□□□□ -0.53
LIMK2-202ENST00000333611 TSPAN3O60637 253 aa11.71□□□□□ -0.53
LIMK2-202ENST00000333611 SEC14L2O76054 403 aa11.71□□□□□ -0.53
LIMK2-202ENST00000333611 SLAMF1Q13291 335 aa11.71□□□□□ -0.53
LIMK2-202ENST00000333611 GTF2H3Q13889 308 aa11.71□□□□□ -0.53
LIMK2-202ENST00000333611 GNA13Q14344 377 aa11.71□□□□□ -0.53
LIMK2-202ENST00000333611 OTUD1Q5VV17 481 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms