RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 RBBP7Q16576 425 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 TTLL9Q3SXZ7 439 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 SERPINA13PQ6UXR4 307 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 PHYKPLQ8IUZ5 450 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 PIP4K2CQ8TBX8 421 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 GDF15Q99988 308 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 NSUN3Q9H649 340 aaKnown RBP16.68■□□□□ 0.26
DDX41-201ENST00000330503 RAD18Q9NS91 495 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 BTRCQ9Y297 605 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 C5orf42Q9H799 3197 aa16.68■□□□□ 0.26
DDX41-201ENST00000330503 KIAA1549LQ6ZVL6 1849 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 AIM2O14862 343 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 GUCA1CO95843 209 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 ALDOCP09972 364 aaKnown RBP16.67■□□□□ 0.26
DDX41-201ENST00000330503 ERVPABLB-1P60509 514 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 GRB7Q14451 532 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 SQLEQ14534 574 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 ERAP2Q6P179 960 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 DEFB107AQ8IZN7 70 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 OR52B6Q8NGF0 335 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 ZNF382Q96SR6 550 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 RNPEPL1Q9HAU8 725 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 TNPO3Q9Y5L0 923 aaKnown RBP16.67■□□□□ 0.26
DDX41-201ENST00000330503 ST14Q9Y5Y6 855 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 REV3LO60673 3130 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 TBC1D3BA6NDS4 549 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 PLK4O00444 970 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 UROSP10746 265 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 AKT1P31749 480 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 GK5Q6ZS86 529 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 GPRIN3Q6ZVF9 776 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 NET1Q7Z628 596 aaPredicted RBP16.67■□□□□ 0.26
DDX41-201ENST00000330503 VRK3Q8IV63 474 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 DDIASQ8IXT1 998 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 CPA6Q8N4T0 437 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 BTN2A2Q8WVV5 523 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 OR8D1Q8WZ84 308 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 PPP2R3CQ969Q6 453 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 RCN3Q96D15 328 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 COQ10AQ96MF6 247 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 KXD1Q9BQD3 176 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 ZSCAN5AQ9BUG6 496 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 NOL11Q9H8H0 719 aaKnown RBP16.67■□□□□ 0.26
DDX41-201ENST00000330503 RDH14Q9HBH5 336 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 ZDHHC4Q9NPG8 344 aa16.67■□□□□ 0.26
DDX41-201ENST00000330503 MYO9BQ13459 2157 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 PSMD12O00232 456 aaPredicted RBP16.66■□□□□ 0.26
DDX41-201ENST00000330503 OR7A17O14581 309 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 OR4F21O95013 312 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 S100BP04271 92 aaPredicted RBP16.66■□□□□ 0.26
DDX41-201ENST00000330503 ELFN1P0C7U0 828 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 ITGB7P26010 798 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 HSPA7P48741 367 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 GTF2H2Q13888 395 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 ACOX1Q15067 660 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 GTF2H2CQ6P1K8 395 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 GOLGA7Q7Z5G4 137 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 ENDOVQ8N8Q3 282 aaKnown RBP16.66■□□□□ 0.26
DDX41-201ENST00000330503 SNX31Q8N9S9 440 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 DDHD1Q8NEL9 900 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 RHBDF1Q96CC6 855 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 DCUN1D1Q96GG9 259 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 WRAP53Q9BUR4 548 aaKnown RBP16.66■□□□□ 0.26
DDX41-201ENST00000330503 NUSAP1Q9BXS6 441 aaKnown RBP16.66■□□□□ 0.26
DDX41-201ENST00000330503 S1PR5Q9H228 398 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 CLEC1BQ9P126 229 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 CRCPO75575 148 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 SORBS2O94875 1100 aaKnown RBP16.66■□□□□ 0.26
DDX41-201ENST00000330503 VCLP18206 1134 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 IL12RB1P42701 662 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 ATP4BP51164 291 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 PKNOX1P55347 436 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 ADAM15Q13444 863 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 PARM1Q6UWI2 310 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 NRSN1Q8IZ57 195 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 DSELQ8IZU8 1212 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 EFCAB3Q8N7B9 438 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 DCBLD1Q8N8Z6 715 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 KYQ8NBH2 561 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 CDK15Q96Q40 435 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 ACOX2Q99424 681 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 TMEM79Q9BSE2 394 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 RPP25Q9BUL9 199 aaKnown RBP16.66■□□□□ 0.26
DDX41-201ENST00000330503 THAP10Q9P2Z0 257 aaPredicted RBP16.66■□□□□ 0.26
DDX41-201ENST00000330503 POLG2Q9UHN1 485 aa16.66■□□□□ 0.26
DDX41-201ENST00000330503 EIF3FO00303 357 aaPredicted RBP16.65■□□□□ 0.26
DDX41-201ENST00000330503 AREL1O15033 823 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 CCNT2O60583 730 aaKnown RBP16.65■□□□□ 0.26
DDX41-201ENST00000330503 ENO3P13929 434 aaPredicted RBP16.65■□□□□ 0.26
DDX41-201ENST00000330503 EZRP15311 586 aaKnown RBP16.65■□□□□ 0.26
DDX41-201ENST00000330503 NUDT2P50583 147 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 HSPA14Q0VDF9 509 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 ELAVL3Q14576 367 aaKnown RBP16.65■□□□□ 0.26
DDX41-201ENST00000330503 AGKQ53H12 422 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 ATAT1Q5SQI0 421 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 SULT1C3Q6IMI6 304 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 LETMD1Q6P1Q0 360 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 MBOAT1Q6ZNC8 495 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 TIFAQ96CG3 184 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 AP2M1Q96CW1 435 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms