RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 EBF1Q9UH73 591 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 ZNF711Q9Y462 761 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 TCRBV5S2A0A599 114 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 PRAMEF1O95521 474 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 MBL2P11226 248 aaPredicted RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 CDK4P11802 303 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 ALDH3B2P48448 385 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 ALDH7A1P49419 539 aaKnown RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 ESRRGP62508 458 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 SMAD3P84022 425 aaKnown RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 FOXM1Q08050 763 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 ILF2Q12905 390 aaKnown RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 GPNMBQ14956 572 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 LRRC23Q53EV4 343 aaPredicted RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 AARS2Q5JTZ9 985 aaKnown RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 HID1Q8IV36 788 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 MFSD2AQ8NA29 543 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 LKAAEAR1Q8TD35 194 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 FIG4Q92562 907 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 SLC22A12Q96S37 553 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 C17orf80Q9BSJ5 609 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 TBCDQ9BTW9 1192 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 IL17CQ9P0M4 197 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 HSFX1Q9UBD0 423 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 ZNHIT2Q9UHR6 403 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 OR7A17O14581 309 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 FFAR2O15552 330 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 FOXD2O60548 495 aaPredicted RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 SLC25A14O95258 325 aaPredicted RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 RASAL1O95294 804 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 RPS9P46781 194 aaKnown RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 TUFMP49411 452 aaKnown RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 MAPK10P53779 464 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 PPP1R8Q12972 351 aaKnown RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 AASDHQ4L235 1098 aaPredicted RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 PDCD4Q53EL6 469 aaKnown RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 COQ5Q5HYK3 327 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 NCEH1Q6PIU2 408 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 CLHC1Q8NHS4 586 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 WFDC5Q8TCV5 224 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 CDK5RAP1Q96SZ6 601 aaKnown RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 THUMPD3Q9BV44 507 aaKnown RBP17.16■□□□□ 0.34
COL9A1-201ENST00000320755 TTLL2Q9BWV7 592 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 ATXN10Q9UBB4 475 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 CDC14AQ9UNH5 594 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 PRSS21Q9Y6M0 314 aa17.16■□□□□ 0.34
COL9A1-201ENST00000320755 A0A087WXM4 84 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 C1orf232A0A0U1RR37 186 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 SMAD6O43541 496 aaKnown RBP17.15■□□□□ 0.34
COL9A1-201ENST00000320755 HMGA1P17096 107 aaKnown RBP17.15■□□□□ 0.34
COL9A1-201ENST00000320755 ELAVL2Q12926 359 aaKnown RBP17.15■□□□□ 0.34
COL9A1-201ENST00000320755 SLC36A3Q495N2 470 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 MBOAT1Q6ZNC8 495 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 ZFAND4Q86XD8 727 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 DTWD1Q8N5C7 304 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 C1QTNF3Q9BXJ4 246 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 LRRC3Q9BY71 257 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 SMPD3Q9NY59 655 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-201ENST00000320755 ZIM2Q9NZV7 527 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 DHRS7Q9Y394 339 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 MYF6P23409 242 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 CACNG1Q06432 222 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 CDH18Q13634 790 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 BORAQ6PGQ7 559 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 SBSNQ6UWP8 590 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 TBC1D21Q8IYX1 336 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 HM13Q8TCT9 377 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 EZH1Q92800 747 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-201ENST00000320755 FEM1AQ9BSK4 669 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 ACTL8Q9H568 366 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 LATS2Q9NRM7 1088 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 KLQ9UEF7 1012 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 AFF4Q9UHB7 1163 aaKnown RBP17.15■□□□□ 0.34
COL9A1-201ENST00000320755 VPS51Q9UID3 782 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 NUP214P35658 2090 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-201ENST00000320755 TMX2-CTNND1H3BSU7 103 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 B4GAT1O43505 415 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 DFNA5O60443 496 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 FCGR1AP12314 374 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 EEF1B2P24534 225 aaKnown RBP17.15■□□□□ 0.34
COL9A1-201ENST00000320755 CSKP41240 450 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 TM4SF4P48230 202 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 CDK9P50750 372 aaKnown RBP17.15■□□□□ 0.34
COL9A1-201ENST00000320755 IST1P53990 364 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 EEFSECP57772 596 aaKnown RBP17.15■□□□□ 0.34
COL9A1-201ENST00000320755 SP3Q02447 781 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 EMX2Q04743 252 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 PHKG1Q16816 387 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 ARMC12Q5T9G4 340 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 PACRGLQ8N7B6 248 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 FBXO30Q8TB52 745 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 RAET1EQ8TD07 263 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 SEPT8Q92599 483 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 LHX3Q9UBR4 397 aa17.15■□□□□ 0.34
COL9A1-201ENST00000320755 CLDN7O95471 211 aa17.14■□□□□ 0.33
COL9A1-201ENST00000320755 CLCN4P51793 760 aa17.14■□□□□ 0.33
COL9A1-201ENST00000320755 CCL23P55773 120 aa17.14■□□□□ 0.33
COL9A1-201ENST00000320755 NEDD8Q15843 81 aa17.14■□□□□ 0.33
COL9A1-201ENST00000320755 DLEU7Q6UYE1 221 aa17.14■□□□□ 0.33
COL9A1-201ENST00000320755 DEFB128Q7Z7B8 93 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms