RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PIP5K1BO14986 540 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 MBL2P11226 248 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 IMPDH1P20839 514 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 CES1P23141 567 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 EEF1DP29692 281 aaKnown RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 STC1P52823 247 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 GRB7Q14451 532 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 C8orf82Q6P1X6 216 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 ABRAXAS1Q6UWZ7 409 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 CCDC117Q8IWD4 279 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 AFAP1L2Q8N4X5 818 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 PDFQ9HBH1 243 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 POLR3BQ9NW08 1133 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 TRPM5Q9NZQ8 1165 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 IFT80Q9P2H3 777 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 NME4O00746 187 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 AXIN1O15169 862 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 TBL1XO60907 577 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 PAPSS2O95340 614 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 MT-ND1P03886 318 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 MC4RP32245 332 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 TTKP33981 857 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 SMAD3P84022 425 aaKnown RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 ATP6AP1Q15904 470 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 SAMD4BQ5PRF9 694 aaKnown RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 TXNDC8Q6A555 127 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 FAM126BQ8IXS8 530 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 RAVER1Q8IY67 606 aaKnown RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 C19orf60Q96EN9 201 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 CDK15Q96Q40 435 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 AKTIPQ9H8T0 292 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 TLR9Q9NR96 1032 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 ATAD3AQ9NVI7 634 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 DNAJC15Q9Y5T4 150 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 NRP2O60462 931 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 JRKO75564 520 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 CDK14O94921 469 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 SNRPB2P08579 225 aaKnown RBP15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 GJA1P17302 382 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 RING1Q06587 406 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 SF3B4Q15427 424 aaKnown RBP eCLIP15.36■□□□□ 0.054e-10■■■■□ 25.6
SHROOM1-201ENST00000319854 PHKG1Q16816 387 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 ABHD11Q8NFV4 315 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 ACOX2Q99424 681 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 CLSTN3Q9BQT9 956 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 LHPPQ9H008 270 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 TPK1Q9H3S4 243 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 PCDH12Q9NPG4 1184 aa15.36■□□□□ 0.05
SHROOM1-201ENST00000319854 SCN5AQ14524 2016 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 DHRS12A0PJE2 317 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 KDM1AO60341 852 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 POLD2P49005 469 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 CCT8P50990 548 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 DNAJB13P59910 316 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 PLIN5Q00G26 463 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 CAPRIN1Q14444 709 aaKnown RBP15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 SPCS2Q15005 226 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 RPS6KA2Q15349 733 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 VPS26BQ4G0F5 336 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 CYHR1Q6ZMK1 362 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 TPGS1Q6ZTW0 290 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 FUNDC1Q8IVP5 155 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 ARL14EPQ8N8R7 260 aaPredicted RBP15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 MAGEE2Q8TD90 523 aaPredicted RBP15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 CCDC126Q96EE4 140 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 SPATA17Q96L03 361 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 PSKH2Q96QS6 385 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 C1orf50Q9BV19 199 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 MROQ9BYG7 248 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 SEZ6LQ9BYH1 1024 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 PIF1Q9H611 641 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 MRPL40Q9NQ50 206 aaKnown RBP15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 C2orf81A6NN90 581 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 STX7O15400 261 aaKnown RBP15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 NDUFB5O43674 189 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 PRLP01236 227 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 FDXRP22570 491 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 HPCAL1P37235 193 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 HK2P52789 917 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 HERVK_113P63132 956 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 AQP6Q13520 282 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 DNASE1L3Q13609 305 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 PGS1Q32NB8 556 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 THOC7Q6I9Y2 204 aaKnown RBP15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 TBPL2Q6SJ96 375 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 DSG4Q86SJ6 1040 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 IFNEQ86WN2 208 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 SLC22A9Q8IVM8 553 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 ERVK-6Q9BXR3 956 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 MAGEH1Q9H213 219 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 B3GNT3Q9Y2A9 372 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 THSD7BQ9C0I4 1608 aa15.35■□□□□ 0.05
SHROOM1-201ENST00000319854 H3BNC9 293 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 ALDOCP09972 364 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 EEF1B2P24534 225 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 CDH4P55283 916 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 C18orf21Q32NC0 220 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 PLA2G4EQ3MJ16 856 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 XAF1Q6GPH4 301 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 RAB44Q7Z6P3 723 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms