RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 FAM71DQ8N9W8 422 aa17.39■□□□□ 0.37
TPM1-203ENST00000317516 OR2L2Q8NH16 312 aa17.39■□□□□ 0.37
TPM1-203ENST00000317516 CATSPER2Q96P56 530 aa17.39■□□□□ 0.37
TPM1-203ENST00000317516 SLC12A9Q9BXP2 914 aa17.39■□□□□ 0.37
TPM1-203ENST00000317516 APMAPQ9HDC9 416 aa17.39■□□□□ 0.37
TPM1-203ENST00000317516 SIDT1Q9NXL6 827 aaKnown RBP17.39■□□□□ 0.37
TPM1-203ENST00000317516 PSMD13Q9UNM6 376 aa17.39■□□□□ 0.37
TPM1-203ENST00000317516 KCTD3Q9Y597 815 aa17.39■□□□□ 0.37
TPM1-203ENST00000317516 SCN8AQ9UQD0 1980 aa17.39■□□□□ 0.37
TPM1-203ENST00000317516 ZNF891A8MT65 544 aaPredicted RBP17.38■□□□□ 0.37
TPM1-203ENST00000317516 AGAP14A8MT82 685 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 FTCDO95954 541 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 PLA2G2AP14555 144 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 CA5AP35218 305 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 CYP4F2P78329 520 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 XIAPP98170 497 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 MSLNQ13421 630 aaPredicted RBP17.38■□□□□ 0.37
TPM1-203ENST00000317516 OLIG2Q13516 323 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 MAP7Q14244 749 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 SPARCL1Q14515 664 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 PLCL1Q15111 1095 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 BCL7AQ4VC05 210 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 DENND5AQ6IQ26 1287 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 FAM83HQ6ZRV2 1179 aaPredicted RBP17.38■□□□□ 0.37
TPM1-203ENST00000317516 SNX20Q7Z614 316 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 TMEM139Q8IV31 216 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 OR13C4Q8NGS5 318 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 KLHL6Q8WZ60 621 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 UBXN4Q92575 508 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 RSC1A1Q92681 617 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 SLC45A3Q96JT2 553 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 LINC00615Q96LM1 132 aaPredicted RBP17.38■□□□□ 0.37
TPM1-203ENST00000317516 ALS2CR12Q96Q35 445 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 OR6C1Q96RD1 312 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 COPS8Q99627 209 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 CCM2Q9BSQ5 444 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 ULBP3Q9BZM4 244 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 LRRC40Q9H9A6 602 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 IMP3Q9NV31 184 aaKnown RBP17.38■□□□□ 0.37
TPM1-203ENST00000317516 PACSIN2Q9UNF0 486 aaPredicted RBP17.38■□□□□ 0.37
TPM1-203ENST00000317516 COLEC10Q9Y6Z7 277 aa17.38■□□□□ 0.37
TPM1-203ENST00000317516 DDX3YO15523 660 aaKnown RBP17.37■□□□□ 0.37
TPM1-203ENST00000317516 SLC35G4P0C7Q5 338 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 MTHFD1P11586 935 aaKnown RBP17.37■□□□□ 0.37
TPM1-203ENST00000317516 ATP1B2P14415 290 aaPredicted RBP17.37■□□□□ 0.37
TPM1-203ENST00000317516 STIP1P31948 543 aaKnown RBP17.37■□□□□ 0.37
TPM1-203ENST00000317516 ZNF140P52738 457 aaPredicted RBP17.37■□□□□ 0.37
TPM1-203ENST00000317516 TMPRSS15P98073 1019 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 MC1RQ01726 317 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 KRT33BQ14525 404 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 GSE1Q14687 1217 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 ARMC6Q6NXE6 501 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 ZNF449Q6P9G9 518 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 BORAQ6PGQ7 559 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 FAM92BQ6ZTR7 304 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 RASGRP3Q8IV61 690 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 KLHDC8BQ8IXV7 354 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 NXPE1Q8N323 547 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 SPC24Q8NBT2 197 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 C12orf66Q96MD2 445 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 DESI2Q9BSY9 194 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 PDE7BQ9NP56 450 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 HEMK1Q9Y5R4 338 aaPredicted RBP17.37■□□□□ 0.37
TPM1-203ENST00000317516 HEBP2Q9Y5Z4 205 aa17.37■□□□□ 0.37
TPM1-203ENST00000317516 C17orf113A0A1B0GUU1 675 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 J3QKU1 62 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 LDB2O43679 373 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 KIF1CO43896 1103 aaKnown RBP17.36■□□□□ 0.37
TPM1-203ENST00000317516 FAM87AP0C7U9 286 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 NELFEP18615 380 aaKnown RBP17.36■□□□□ 0.37
TPM1-203ENST00000317516 NDUFS1P28331 727 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 ARL4DP49703 201 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 KLF1Q13351 362 aaPredicted RBP17.36■□□□□ 0.37
TPM1-203ENST00000317516 KCTD11Q693B1 232 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 C6orf15Q6UXA7 325 aaPredicted RBP17.36■□□□□ 0.37
TPM1-203ENST00000317516 TIPARPQ7Z3E1 657 aaKnown RBP17.36■□□□□ 0.37
TPM1-203ENST00000317516 LINC00523Q86TU6 105 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 BPHLQ86WA6 291 aaPredicted RBP17.36■□□□□ 0.37
TPM1-203ENST00000317516 PPP1R3BQ86XI6 285 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 CFAP206Q8IYR0 622 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 HES6Q96HZ4 224 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 INSM2Q96T92 566 aaPredicted RBP17.36■□□□□ 0.37
TPM1-203ENST00000317516 CD180Q99467 661 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 TMEM121Q9BTD3 319 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 TSGA10Q9BZW7 698 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 FAM117AQ9C073 453 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 WWP1Q9H0M0 922 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 VPS37BQ9H9H4 285 aa17.36■□□□□ 0.37
TPM1-203ENST00000317516 ZFC3H1O60293 1989 aaKnown RBP17.36■□□□□ 0.37
TPM1-203ENST00000317516 ZNF462Q96JM2 2506 aa17.35■□□□□ 0.37
TPM1-203ENST00000317516 LOC101059948A0A1B0GTJ6 334 aa17.35■□□□□ 0.37
TPM1-203ENST00000317516 METTL18O95568 372 aa17.35■□□□□ 0.37
TPM1-203ENST00000317516 DLGAP3O95886 979 aa17.35■□□□□ 0.37
TPM1-203ENST00000317516 GAS8O95995 478 aa17.35■□□□□ 0.37
TPM1-203ENST00000317516 POLBP06746 335 aa17.35■□□□□ 0.37
TPM1-203ENST00000317516 CCNYL3P0C7X3 344 aa17.35■□□□□ 0.37
TPM1-203ENST00000317516 MC4RP32245 332 aa17.35■□□□□ 0.37
TPM1-203ENST00000317516 SH3BP2P78314 561 aa17.35■□□□□ 0.37
TPM1-203ENST00000317516 NFATC3Q12968 1075 aa17.35■□□□□ 0.37
TPM1-203ENST00000317516 ZRANB3Q5FWF4 1079 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms