RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 GIN1Q9NXP7 522 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 ITGB1BP2Q9UKP3 347 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 PCDHA9Q9Y5H5 950 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 WASH4PA8MWX3 477 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 ACSL4O60488 711 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 RPS3AP61247 264 aaKnown RBP16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 RING1Q06587 406 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 ACAP2Q15057 778 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 UNC50Q53HI1 259 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 TBC1D21Q8IYX1 336 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 HS6ST3Q8IZP7 471 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 CLYBLQ8N0X4 340 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 ARL14EPQ8N8R7 260 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 PDZD8Q8NEN9 1154 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 TMEM125Q96AQ2 219 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 TRMOQ9BU70 441 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 GPN2Q9H9Y4 310 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 COMMD8Q9NX08 183 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 WARS2Q9UGM6 360 aaKnown RBP16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 CPQQ9Y646 472 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 F5H5T6 163 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 RAMP2O60895 175 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 JUNBP17275 347 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 EEF1DP29692 281 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 HTR7P34969 479 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 ERVFC1P60507 584 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 SH3BP2P78314 561 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 NFYCQ13952 458 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 TMEM214Q6NUQ4 689 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 ABHD11Q8NFV4 315 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 OR7D4Q8NG98 312 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 PIF1Q9H611 641 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 SP110Q9HB58 689 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 TREX1Q9NSU2 369 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 TMED5Q9Y3A6 229 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 TSC22D4Q9Y3Q8 395 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 ST14Q9Y5Y6 855 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 ZFC3H1O60293 1989 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 RSL1D1O76021 490 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 CXCL14O95715 111 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 FOXA1P55317 472 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 CYP4F8P98187 520 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 DSC2Q02487 901 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 LIPEQ05469 1076 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 GPR158Q5T848 1215 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 KIAA0930Q6ICG6 404 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 ITIH5Q86UX2 942 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 PGBD5Q8N414 524 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 TWIST2Q8WVJ9 160 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 TUBGCP3Q96CW5 907 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 ALPK1Q96QP1 1244 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 FSD1LQ9BXM9 530 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 AGO1Q9UL18 857 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 USP22Q9UPT9 525 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 GPC6Q9Y625 555 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 LTBP2Q14767 1821 aa16.97■□□□□ 0.31
SCAMP4-201ENST00000316097 HIDE1A8MVS5 230 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 H0Y858 1186 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 H3BMM5 538 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 LILRB3O75022 631 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 ANXA9O76027 345 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 CES1P23141 567 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 PLA2G16P53816 162 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 VEPH1Q14D04 833 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 SPCS2Q15005 226 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 OXA1LQ15070 435 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 HECTD2Q5U5R9 776 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 MARC1Q5VT66 337 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 PIWIL3Q7Z3Z3 882 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 VPS33AQ96AX1 596 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 FCRL5Q96RD9 977 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 KCNA7Q96RP8 456 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 SPON2Q9BUD6 331 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 MID1IP1Q9NPA3 183 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 TLR9Q9NR96 1032 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 VWA7Q9Y334 891 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 H0YAE9 185 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 MUSKO15146 869 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 CACNG3O60359 315 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 ABCB7O75027 752 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 HGFP14210 728 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 CD86P42081 329 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 NAT16Q8N8M0 369 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 UBXN10Q96LJ8 280 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 RNF145Q96MT1 663 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 TMEM74Q96NL1 305 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 ZNF347Q96SE7 839 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 ZBP1Q9H171 429 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 KIAA1522Q9P206 1035 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 BTRCQ9Y297 605 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 UNC80Q8N2C7 3258 aa16.96■□□□□ 0.31
SCAMP4-201ENST00000316097 LRRC14BA6NHZ5 514 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 AQP9O43315 295 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 KDM1AO60341 852 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 SIX3O95343 332 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 IL7RP16871 459 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 CASP2P42575 452 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 CLCN5P51795 746 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 RAD23AP54725 363 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 EPHB3P54753 998 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms