RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 HMGCLP35914 325 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 GRIA3P42263 894 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 WASP42768 502 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 SLC6A11P48066 632 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 EMP3P54852 163 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 SULT2A1Q06520 285 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 FRG1Q14331 258 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 CAPRIN1Q14444 709 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ACAP2Q15057 778 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 SLC44A4Q53GD3 710 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 INO80DQ53TQ3 878 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ARSIQ5FYB1 569 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ALG1LQ6GMV1 187 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 PTRHD1Q6GMV3 140 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 C16orf89Q6UX73 402 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 GET4Q7L5D6 327 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 CUZD1Q86UP6 607 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ADIPOR2Q86V24 386 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 SERPINA9Q86WD7 417 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 DDIASQ8IXT1 998 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 TTC30BQ8N4P2 665 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 TMEM102Q8N9M5 508 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 KDM1BQ8NB78 822 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 HMGCLL1Q8TB92 370 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 MIPOL1Q8TD10 442 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 FUBP1Q96AE4 644 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 BTBD9Q96Q07 612 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 SERPINI1Q99574 410 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 AARSD1Q9BTE6 412 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 Q9H521 79 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ARMC7Q9H6L4 198 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 MID1IP1Q9NPA3 183 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 SPHK2Q9NRA0 654 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 C6orf203Q9P0P8 240 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ANKRD6Q9Y2G4 727 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 YBX2Q9Y2T7 364 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ATG2BQ96BY7 2078 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ARHGAP10A1A4S6 786 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 LEFTY1O75610 366 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 PABPC1P11940 636 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 TPP2P29144 1249 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 EEF1DP29692 281 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 PSME3P61289 254 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 XIAPP98170 497 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 PTSQ03393 145 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 GPM6BQ13491 265 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 RFTN1Q14699 578 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 FAM45BPQ6NSW5 357 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 AFTPHQ6ULP2 937 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 CRTC1Q6UUV9 634 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 XKR5Q6UX68 686 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 FAM45AQ8TCE6 357 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 FOXJ1Q92949 421 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 MRPS26Q9BYN8 205 aaKnown RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ATP13A3Q9H7F0 1226 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 TMCO1Q9UM00 188 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 DMTF1Q9Y222 760 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 RAP2CQ9Y3L5 183 aa7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ARIH1Q9Y4X5 557 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-202ENST00000315962 ZFC3H1O60293 1989 aaKnown RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 TANC1Q9C0D5 1861 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 A0A0J9YYE9 177 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 EPOPA6NHQ4 379 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 OR2AG2A6NM03 316 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 GFRA2O00451 464 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 DENRO43583 198 aaKnown RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 FZD6O60353 706 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ECI2O75521 394 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 SLC25A14O95258 325 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 TRBC1P01850 177 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ALOX15P16050 662 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF26P17031 533 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ACVR1Q04771 509 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 HSPA14Q0VDF9 509 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 NFATC2Q13469 925 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 GRIN2CQ14957 1233 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 DBN1Q16643 649 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ATP13A5Q4VNC0 1218 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 LDLRAP1Q5SW96 308 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 HMBOX1Q6NT76 420 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 Q6ZVL8 140 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 LMNTD1Q8N9Z9 388 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 OR2A12Q8NGT7 310 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 FATE1Q969F0 183 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ACDQ96AP0 544 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 VOPP1Q96AW1 172 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 DTNBP1Q96EV8 351 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 TSPAN17Q96FV3 270 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 FBXL20Q96IG2 436 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 WRAP53Q9BUR4 548 aaKnown RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 LATS2Q9NRM7 1088 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 CHCHD3Q9NX63 227 aaKnown RBP7.5□□□□□ -1.21
TRIM55-202ENST00000315962 CD274Q9NZQ7 290 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 ZMYM5Q9UJ78 669 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 CRLS1Q9UJA2 301 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 COQ6Q9Y2Z9 468 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 AP4S1Q9Y587 144 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 MIA3Q5JRA6 1907 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 PRSS51A0A1B0GVH4 220 aa7.5□□□□□ -1.21
TRIM55-202ENST00000315962 J3QRK9 145 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms