RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 HOPXQ9BPY8 73 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 KLF16Q9BXK1 252 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 NUSAP1Q9BXS6 441 aaKnown RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 GABARAPL3Q9BY60 117 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 TRPV4Q9HBA0 871 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 ABCC13Q9NSE7 274 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 ZIM2Q9NZV7 527 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 PADI3Q9ULW8 664 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 ARL5AQ9Y689 179 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 SLC30A1Q9Y6M5 507 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 ARHGAP42A6NI28 874 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 SOD1P00441 154 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 FAM200BP0CF97 657 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 EEFSECP57772 596 aaKnown RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 MERTKQ12866 999 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 RALGDSQ12967 914 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 GPR158Q5T848 1215 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 PSAPL1Q6NUJ1 521 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 EFHBQ8N7U6 833 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 CEP70Q8NHQ1 597 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 FAM81AQ8TBF8 368 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 WDR20Q8TBZ3 569 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 SPPL3Q8TCT6 385 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 CHTF18Q8WVB6 975 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 LPPQ93052 612 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 TRMT2BQ96GJ1 504 aaKnown RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 PRKD2Q9BZL6 878 aa7.72□□□□□ -1.17
CNOT4-201ENST00000315544 NFKBIL1Q9UBC1 381 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-201ENST00000315544 A0A1W2PQH9 124 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 CCDC162PA2VCL2 907 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 ANHXE9PGG2 379 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 PIP5K1BO14986 540 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 PSMD3O43242 534 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 KDELR3O43731 214 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 ESRRBO95718 433 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 GOT2P00505 430 aaKnown RBP7.71□□□□□ -1.17
CNOT4-201ENST00000315544 MX2P20592 715 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 ENDOUP21128 410 aaKnown RBP7.71□□□□□ -1.17
CNOT4-201ENST00000315544 GBP2P32456 591 aaPredicted RBP7.71□□□□□ -1.17
CNOT4-201ENST00000315544 DSC2Q02487 901 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 DCDC5Q6ZRR9 648 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 SLC24A5Q71RS6 500 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 CYP4Z1Q86W10 505 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 ATCAYQ86WG3 371 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 ANKRD13BQ86YJ7 626 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 SPARTQ8N0X7 666 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 OR8J3Q8NGG0 315 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 ITFG2Q969R8 447 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 PSMG2Q969U7 264 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 TSC22D3Q99576 134 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 TTC1Q99614 292 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 DDX18Q9NVP1 670 aaKnown RBP7.71□□□□□ -1.17
CNOT4-201ENST00000315544 IL17CQ9P0M4 197 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 RUVBL2Q9Y230 463 aaKnown RBP7.71□□□□□ -1.17
CNOT4-201ENST00000315544 ANKRD12Q6UB98 2062 aa7.71□□□□□ -1.17
CNOT4-201ENST00000315544 TTC34A8MYJ7 566 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 GFYI3L273 518 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 MAGEB3O15480 346 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 TRMUO75648 421 aaKnown RBP7.71□□□□□ -1.18
CNOT4-201ENST00000315544 SIX3O95343 332 aaPredicted RBP7.71□□□□□ -1.18
CNOT4-201ENST00000315544 ERGP11308 486 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 GSTM2P28161 218 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 HTR1BP28222 390 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 ACVRL1P37023 503 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 CD300CQ08708 224 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 NAPEPLDQ6IQ20 393 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 TRMT1LQ7Z2T5 733 aaKnown RBP7.71□□□□□ -1.18
CNOT4-201ENST00000315544 TMC8Q8IU68 726 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 WFDC5Q8TCV5 224 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 BRSK1Q8TDC3 778 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 C11orf16Q9NQ32 467 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 VAPAQ9P0L0 249 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 SLC8A2Q9UPR5 921 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 DTNAQ9Y4J8 743 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 AP4S1Q9Y587 144 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 A0A0D9SEW6 157 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 GOLGA8QA0A0J9YX86 632 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 GOLGA8OA6NCC3 632 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 GOLGA8NF8WBI6 632 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 ECI2O75521 394 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 SNRPB2P08579 225 aaKnown RBP7.71□□□□□ -1.18
CNOT4-201ENST00000315544 TDGF1P13385 188 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 CKMT2P17540 419 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 GSK3BP49841 420 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 AGTR2P50052 363 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 PTPRNQ16849 979 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 GAB4Q2WGN9 574 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 TMEM259Q4ZIN3 620 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 FGD3Q5JSP0 725 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 C6orf136Q5SQH8 315 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 TAS1R1Q7RTX1 841 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 SNX31Q8N9S9 440 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 C12orf43Q96C57 262 aaKnown RBP7.71□□□□□ -1.18
CNOT4-201ENST00000315544 MROQ9BYG7 248 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 KCNH6Q9H252 994 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 PALMDQ9NP74 551 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 GIN1Q9NXP7 522 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 KLHL42Q9P2K6 505 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 SCOCQ9UIL1 159 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 TSC22D4Q9Y3Q8 395 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms