RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TRAFD1O14545 582 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 SGTAO43765 313 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 TRUB2O95900 331 aaKnown RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 FTH1P02794 183 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 MT-ND1P03886 318 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 IFNA6P05013 189 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 PTPN3P26045 913 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 NRG1Q02297 640 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 REP15Q6BDI9 236 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 FAM171BQ6P995 826 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 STK40Q8N2I9 435 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CLIP4Q8N3C7 705 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 LRRN4Q8WUT4 740 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 COQ10BQ9H8M1 238 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 LRRC4CQ9HCJ2 640 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 SPEF2Q9C093 1822 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 DLG5Q8TDM6 1919 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 PRODHO43272 600 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 TLR5O60602 858 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CCNDBP1O95273 360 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 PGLSO95336 258 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CRHR1P34998 444 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 TIE1P35590 1138 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 WDR5P61964 334 aaKnown RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 RGS1Q08116 209 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CYP2A13Q16696 494 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 INTS6LQ5JSJ4 861 aaKnown RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 OR4A15Q8NGL6 344 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 SNX27Q96L92 541 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 MFSD14AQ96MC6 490 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 ZNF285Q96NJ3 590 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 TEFMQ96QE5 360 aaKnown RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 C8orf33Q9H7E9 229 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 POPDC2Q9HBU9 364 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 ACP6Q9NPH0 428 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 TRAF6Q9Y4K3 522 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 FABP12A6NFH5 140 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 SIGLEC16A6NMB1 481 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 RBAK-RBAKDNI3L0D1 243 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CHST10O43529 356 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 H6PDO95479 791 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 IFNA7P01567 189 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 UGT2B4P06133 528 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 ADGRE1Q14246 886 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 RALGPS1Q5JS13 557 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 TRIM40Q6P9F5 258 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 AFTPHQ6ULP2 937 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 USP43Q70EL4 1123 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CMC1Q7Z7K0 106 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CUZD1Q86UP6 607 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 SPAG16Q8N0X2 631 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 OR52K2Q8NGK3 314 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 MAFAQ8NHW3 353 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 HDAC2Q92769 488 aaKnown RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 AHCYL2Q96HN2 611 aaKnown RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 FEM1AQ9BSK4 669 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 TKTL2Q9H0I9 626 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 FZD8Q9H461 694 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 ZNF99A8MXY4 864 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 H3BM21 787 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 SLC30A4O14863 429 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 BUD23O43709 281 aaKnown RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 ZNF623O75123 536 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 NCK1P16333 377 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 SLC6A2P23975 617 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 DPP6P42658 865 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 SNRPD1P62314 119 aaKnown RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 GNA12Q03113 381 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 GRM3Q14832 879 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 DLG2Q15700 870 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 VWA5B1Q5TIE3 1220 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 SYCE2Q6PIF2 218 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 NCCRP1Q6ZVX7 275 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 CD101Q93033 1021 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CENPNQ96H22 339 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 QRFPRQ96P65 431 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 KAT8Q9H7Z6 458 aaKnown RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 SPATA6Q9NWH7 488 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 KIAA1522Q9P206 1035 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 FAM155BO75949 473 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 SNX4O95219 450 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 RPLP0P05388 317 aaKnown RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 YES1P07947 543 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 CD83Q01151 205 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 NADK2Q4G0N4 442 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 COLEC12Q5KU26 742 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 HLA-DQA1Q5Y7H0 255 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 CNSTQ6PJW8 725 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 GPR156Q8NFN8 814 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 CXorf40AQ8TE69 158 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 COL26A1Q96A83 441 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 CEP295NLQ96MC4 621 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 C16orf70Q9BSU1 422 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 C12orf65Q9H3J6 166 aaKnown RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 ERVK-5Q9HDB9 667 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 MED11Q9P086 117 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 REXO2Q9Y3B8 237 aaKnown RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 hCG_1818297A0A087WSY0 165 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 PDLIM1O00151 329 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms