RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ZNF514Q96K75 400 aaPredicted RBP22.17■■□□□ 1.14
IRF3-201ENST00000309877 TRIM55Q9BYV6 548 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 NPHS2Q9NP85 383 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 CD93Q9NPY3 652 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 ITM2CQ9NQX7 267 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 ATXN10Q9UBB4 475 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 LRRC72A6NJI9 287 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 TGDSO95455 350 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 TEAD1P28347 426 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 CDK3Q00526 305 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 NFKB2Q00653 900 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 BCL7AQ4VC05 210 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 SYTL3Q4VX76 610 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 TRAPPC5Q8IUR0 188 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 PTGR2Q8N8N7 351 aaPredicted RBP22.16■■□□□ 1.14
IRF3-201ENST00000309877 FAM126AQ9BYI3 521 aaPredicted RBP22.16■■□□□ 1.14
IRF3-201ENST00000309877 WDR26Q9H7D7 661 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 SGK2Q9HBY8 427 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 ACSS2Q9NR19 701 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 TMCO1Q9UM00 188 aa22.16■■□□□ 1.14
IRF3-201ENST00000309877 STK25O00506 426 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 ACSL1P33121 698 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 PPP2CBP62714 309 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 PPP2CAP67775 309 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 FZD5Q13467 585 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 RCN2Q14257 317 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 PFKFB4Q16877 469 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 CYHR1Q6ZMK1 362 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 FBXO39Q8N4B4 442 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 TSTD1Q8NFU3 115 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 OR2T34Q8NGX1 318 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 SKA2Q8WVK7 121 aaPredicted RBP22.15■■□□□ 1.14
IRF3-201ENST00000309877 TMEM237Q96Q45 408 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 TEX101Q9BY14 249 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 DRC3Q9H069 523 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 CD274Q9NZQ7 290 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 KLHL14Q9P2G3 628 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 TMEM98Q9Y2Y6 226 aa22.15■■□□□ 1.14
IRF3-201ENST00000309877 SLC31A1O15431 190 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 NPHS1O60500 1241 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 SNX2O60749 519 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 MTHFD2P13995 350 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 ZNF8P17098 575 aaPredicted RBP22.14■■□□□ 1.14
IRF3-201ENST00000309877 IMPDH1P20839 514 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 ANO7Q6IWH7 933 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 DOK6Q6PKX4 331 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 ASB12Q8WXK4 309 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 MOCOSQ96EN8 888 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 CNDP1Q96KN2 507 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 PHPT1Q9NRX4 125 aaPredicted RBP22.14■■□□□ 1.14
IRF3-201ENST00000309877 USP36Q9P275 1121 aaKnown RBP22.14■■□□□ 1.14
IRF3-201ENST00000309877 FAM8A1Q9UBU6 413 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 EBF1Q9UH73 591 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 DNAJC16Q9Y2G8 782 aa22.14■■□□□ 1.14
IRF3-201ENST00000309877 NCF1BA6NI72 391 aaPredicted RBP22.14■■□□□ 1.13
IRF3-201ENST00000309877 NCF1CA8MVU1 366 aaPredicted RBP22.14■■□□□ 1.13
IRF3-201ENST00000309877 NUAK1O60285 661 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 KITP10721 976 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 NCF1P14598 390 aaPredicted RBP22.14■■□□□ 1.13
IRF3-201ENST00000309877 PBLDP30039 288 aaPredicted RBP22.14■■□□□ 1.13
IRF3-201ENST00000309877 TRIM23P36406 574 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 SERPINB5P36952 375 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 GAS6Q14393 721 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 GBX1Q14549 363 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 SORT1Q99523 831 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 TBC1D17Q9HA65 648 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 UTP6Q9NYH9 597 aaKnown RBP22.14■■□□□ 1.13
IRF3-201ENST00000309877 NUDT4Q9NZJ9 180 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 GPR34Q9UPC5 381 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 ARL2BPQ9Y2Y0 163 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 OR1A2Q9Y585 309 aa22.14■■□□□ 1.13
IRF3-201ENST00000309877 ERICH4A6NGS2 130 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 RAD51BO15315 384 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 GPC4O75487 556 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 S100BP04271 92 aaPredicted RBP22.13■■□□□ 1.13
IRF3-201ENST00000309877 MPC1LP0DKB6 136 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 ARRB2P32121 409 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 HERVK_113P63132 956 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 TGFBIQ15582 683 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 ZSCAN26Q16670 478 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 ARL13AQ5H913 290 aaPredicted RBP22.13■■□□□ 1.13
IRF3-201ENST00000309877 TMEM31Q5JXX7 168 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 SBSNQ6UWP8 590 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 TRIM69Q86WT6 500 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 TMEM159Q96B96 161 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 L3HYPDHQ96EM0 354 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 TRPM6Q9BX84 2022 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 LGR4Q9BXB1 951 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 ERVK-6Q9BXR3 956 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 ILKAPQ9H0C8 392 aaPredicted RBP22.13■■□□□ 1.13
IRF3-201ENST00000309877 MARCOQ9UEW3 520 aaPredicted RBP22.13■■□□□ 1.13
IRF3-201ENST00000309877 DCTN4Q9UJW0 460 aa22.13■■□□□ 1.13
IRF3-201ENST00000309877 TMEM202A6NGA9 273 aa22.12■■□□□ 1.13
IRF3-201ENST00000309877 EBAG9O00559 213 aa22.12■■□□□ 1.13
IRF3-201ENST00000309877 ZNF678Q5SXM1 525 aa22.12■■□□□ 1.13
IRF3-201ENST00000309877 RFWD2Q8NHY2 731 aa22.12■■□□□ 1.13
IRF3-201ENST00000309877 PIWIL2Q8TC59 973 aaKnown RBP22.12■■□□□ 1.13
IRF3-201ENST00000309877 HHIPQ96QV1 700 aa22.12■■□□□ 1.13
IRF3-201ENST00000309877 FZD3Q9NPG1 666 aa22.12■■□□□ 1.13
IRF3-201ENST00000309877 C2orf42Q9NWW7 574 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms