RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 ABI1Q8IZP0 508 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 LKAAEAR1Q8TD35 194 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 ISG20Q96AZ6 181 aaKnown RBP20.55■□□□□ 0.88
RELA-201ENST00000308639 NSUN3Q9H649 340 aaKnown RBP20.55■□□□□ 0.88
RELA-201ENST00000308639 CXorf21Q9HAI6 301 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 FARSBQ9NSD9 589 aaKnown RBP20.55■□□□□ 0.88
RELA-201ENST00000308639 SMPD4Q9NXE4 827 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 DNMT3LQ9UJW3 386 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 PCDHB9Q9Y5E1 797 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 OR6C75A6NL08 312 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 COCHO43405 550 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 TTPAP49638 278 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 EEFSECP57772 596 aaKnown RBP20.55■□□□□ 0.88
RELA-201ENST00000308639 PRKG2Q13237 762 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 FUT10Q6P4F1 479 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 CYP20A1Q6UW02 462 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 RNF168Q8IYW5 571 aaPredicted RBP20.55■□□□□ 0.88
RELA-201ENST00000308639 HS3ST5Q8IZT8 346 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 TTC30BQ8N4P2 665 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 CLDN19Q8N6F1 224 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 TNIP2Q8NFZ5 429 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 NEUROG3Q9Y4Z2 214 aa20.55■□□□□ 0.88
RELA-201ENST00000308639 A8MX80 341 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 DFNA5O60443 496 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 CD247P20963 164 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 NFKBIAP25963 317 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 HSPA7P48741 367 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 CLCN7P51798 805 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 LAPTM5Q13571 262 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 TXNDC11Q6PKC3 985 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 ABRAXAS1Q6UWZ7 409 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 KCTD8Q6ZWB6 473 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 FRA10AC1Q70Z53 315 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 HID1Q8IV36 788 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 TBC1D21Q8IYX1 336 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 LRRC43Q8N309 656 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 NSMCE2Q96MF7 247 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 MUS81Q96NY9 551 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 LRRC3Q9BY71 257 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 RIC8BQ9NVN3 520 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 FCF1Q9Y324 198 aaKnown RBP20.54■□□□□ 0.88
RELA-201ENST00000308639 TET1Q8NFU7 2136 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 A0A1W2PPW3 197 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 MOXD2PA6NHM9 499 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 TRIM64CA6NLI5 447 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 MZF1P28698 734 aaPredicted RBP20.54■□□□□ 0.88
RELA-201ENST00000308639 SHMT2P34897 504 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 SLC11A2P49281 568 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 FAM189BP81408 668 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 AP5B1Q2VPB7 878 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 ANKDD1AQ495B1 522 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 SGO1Q5FBB7 561 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 KLHL35Q6PF15 583 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 FAM151BQ6UXP7 276 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 NAT16Q8N8M0 369 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 ZNF382Q96SR6 550 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 ZIM2Q9NZV7 527 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 PLXNA4Q9HCM2 1894 aa20.54■□□□□ 0.88
RELA-201ENST00000308639 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.53■□□□□ 0.88
RELA-201ENST00000308639 LSM1O15116 133 aaKnown RBP20.53■□□□□ 0.88
RELA-201ENST00000308639 ACLYP53396 1101 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 SEMG2Q02383 582 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 ZNF177Q13360 481 aaPredicted RBP20.53■□□□□ 0.88
RELA-201ENST00000308639 PATL1Q86TB9 770 aaKnown RBP20.53■□□□□ 0.88
RELA-201ENST00000308639 FAM126BQ8IXS8 530 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 ALDH16A1Q8IZ83 802 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 PPP1R14BQ96C90 147 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 APOL5Q9BWW9 433 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 RNF38Q9H0F5 515 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 IKZF5Q9H5V7 419 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 ELOVL2Q9NXB9 296 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 VAPAQ9P0L0 249 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 MKI67P46013 3256 aaKnown RBP20.53■□□□□ 0.88
RELA-201ENST00000308639 K7ERQ8 282 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 UPK1AO00322 258 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 RPLP2P05387 115 aaKnown RBP20.53■□□□□ 0.88
RELA-201ENST00000308639 ENO2P09104 434 aaPredicted RBP20.53■□□□□ 0.88
RELA-201ENST00000308639 FCGR1AP12314 374 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 HTR1EP28566 365 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 GKP32189 559 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 RPL38P63173 70 aaKnown RBP20.53■□□□□ 0.88
RELA-201ENST00000308639 HMGCS1Q01581 520 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 C5orf22Q49AR2 442 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 FGD3Q5JSP0 725 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 SBSNQ6UWP8 590 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 ENPP6Q6UWR7 440 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 PAPD5Q8NDF8 572 aaKnown RBP20.53■□□□□ 0.88
RELA-201ENST00000308639 FBXO30Q8TB52 745 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 TSPEARQ8WU66 669 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 FIG4Q92562 907 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 KCNJ9Q92806 393 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 SPATA17Q96L03 361 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 TM6SF2Q9BZW4 377 aa20.53■□□□□ 0.88
RELA-201ENST00000308639 TMEM88BA6NKF7 163 aa20.52■□□□□ 0.88
RELA-201ENST00000308639 STC2O76061 302 aa20.52■□□□□ 0.88
RELA-201ENST00000308639 HNRNPCP07910 306 aaKnown RBP eCLIP20.52■□□□□ 0.88
RELA-201ENST00000308639 FCGRTP55899 365 aa20.52■□□□□ 0.88
RELA-201ENST00000308639 CBX3Q13185 183 aa20.52■□□□□ 0.88
RELA-201ENST00000308639 NKG7Q16617 165 aa20.52■□□□□ 0.88
RELA-201ENST00000308639 CXorf57Q6NSI4 855 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms