RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TEKT5Q96M29 485 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 KLHL4Q9C0H6 718 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 A8MUI8 341 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 SLC22A3O75751 556 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 PDE5AO76074 875 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 STATHP02808 62 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 CCND1P24385 295 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 PRRT3Q5FWE3 981 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 RTP2Q5QGT7 225 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 TMEM110Q86TL2 294 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 CUZD1Q86UP6 607 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 TMPRSS6Q8IU80 811 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 ZDHHC13Q8IUH4 622 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 VANGL1Q8TAA9 524 aaPredicted RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 SLC35F5Q8WV83 523 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 BCL2L14Q9BZR8 327 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 CNOT6Q9ULM6 557 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 TIMM22Q9Y584 194 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 MYL12BO14950 172 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 RNGTTO60942 597 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 KAT7O95251 611 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 PRG2P13727 222 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 SMIM11AP58511 58 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 PRR5P85299 388 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 CLLU1OSQ5K130 101 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 SPDYCQ5MJ68 293 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 SLC29A4Q7RTT9 530 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 ADGRG6Q86SQ4 1221 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 RNASE11Q8TAA1 199 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 DENND1AQ8TEH3 1009 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 HHIPL1Q96JK4 782 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 ZIC5Q96T25 663 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 TMEM79Q9BSE2 394 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 ZNF576Q9H609 170 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 COPG1Q9Y678 874 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 NRAPQ86VF7 1730 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 CCDC162PA2VCL2 907 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 ARHGEF9O43307 516 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 LEFTY1O75610 366 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 PAK4O96013 591 aaPredicted RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 UNGP13051 313 aaPredicted RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 ZNF30P17039 623 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 PRKCHP24723 683 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 TPP2P29144 1249 aaPredicted RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 HK2P52789 917 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 NPY5RQ15761 445 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 NEK10Q6ZWH5 1172 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 DNAJC9Q8WXX5 260 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 C19orf60Q96EN9 201 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 SLC38A2Q96QD8 506 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 CEP44Q9C0F1 390 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 NOD2Q9HC29 1040 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 CORO1CQ9ULV4 474 aaPredicted RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 OR10H3O60404 316 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 IPO13O94829 963 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 PROCP04070 461 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 CASP9P55211 416 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 NTHL1P78549 312 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 LMAN2Q12907 356 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 DHCR24Q15392 516 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 ZCWPW2Q504Y3 356 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 ZNF805Q5CZA5 627 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 ERN2Q76MJ5 926 aaKnown RBP10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 DENND6AQ8IWF6 608 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 GRIP2Q9C0E4 1043 aa10.56□□□□□ -0.72
SYNPO2-201ENST00000307142 EVPLQ92817 2033 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 DEAF1O75398 565 aaPredicted RBP10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 POP7O75817 140 aaKnown RBP10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 TRAPPC6AO75865 159 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 GIMD1P0DJR0 217 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 JUPP14923 745 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 FGFR3P22607 806 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 VHLP40337 213 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 NEK2P51955 445 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 RPLP0P6Q8NHW5 317 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 NECTIN3Q9NQS3 549 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 SUSD2Q9UGT4 822 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 GNEQ9Y223 722 aaKnown RBP10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 DGKBQ9Y6T7 804 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 TTC34A8MYJ7 566 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 ZMPSTE24O75844 475 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 EPHA3P29320 983 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 RBMS1P29558 406 aaKnown RBP10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 HNRNPH3P31942 346 aaKnown RBP10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 UGT2B15P54855 530 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 PSMD4P55036 377 aaKnown RBP10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 TMC8Q8IU68 726 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 AGAP2Q99490 1192 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 ECM29Q5VYK3 1845 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 A0A0G2JN53 185 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 OR51F1A6NGY5 319 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 FAM25AB3EWG3 89 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 FAM25CB3EWG5 89 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 FAM25GB3EWG6 89 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 PTPN4P29074 926 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 STK19P49842 368 aaPredicted RBP10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 NRG1Q02297 640 aaPredicted RBP10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 PPIDQ08752 370 aaKnown RBP10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 KLHL25Q9H0H3 589 aa10.55□□□□□ -0.72
SYNPO2-201ENST00000307142 NEK6Q9HC98 313 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms