RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 TMED2Q15363 201 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 TYSND1Q2T9J0 566 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 MAP9Q49MG5 647 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 MSS51Q4VC12 460 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 GLE1Q53GS7 698 aaKnown RBP10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 HP1BP3Q5SSJ5 553 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 AGAP9Q5VTM2 703 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 NEPROQ6NW34 567 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 IYDQ6PHW0 289 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 WASH2PQ6VEQ5 465 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 TMPRSS12Q86WS5 348 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 LRRC6Q86X45 466 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 C17orf82Q86X59 251 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CILP2Q8IUL8 1156 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 SFTPA2Q8IWL1 248 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CFAP206Q8IYR0 622 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CHCHD4Q8N4Q1 142 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CLDN19Q8N6F1 224 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 Q8N9G6 341 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 GPR150Q8NGU9 434 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 AHCYL2Q96HN2 611 aaKnown RBP10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 C12orf66Q96MD2 445 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 FCRL3Q96P31 734 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 DEPDC7Q96QD5 511 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 GFM1Q96RP9 751 aaKnown RBP10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 TCF12Q99081 682 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 LRRC1Q9BTT6 524 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CCDC68Q9H2F9 335 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 COG4Q9H9E3 785 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 SARS2Q9NP81 518 aaKnown RBP10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 PPANQ9NQ55 473 aaKnown RBP10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 WASH6PQ9NQA3 447 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 INTS10Q9NVR2 710 aaKnown RBP10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 IL1RAPL1Q9NZN1 696 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 ANGPTL2Q9UKU9 493 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 PSMD13Q9UNM6 376 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 PCDHB1Q9Y5F3 818 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 FAM169AQ9Y6X4 670 aa10.79□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 MED19A0JLT2 244 aaPredicted RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 A6NCN8 305 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 E5RI56 91 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 H3BMM5 538 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 LIN7AO14910 233 aaPredicted RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 EIF3HO15372 352 aaKnown RBP eCLIP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 SGTAO43765 313 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 TCEA3O75764 348 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 JUPP14923 745 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 ITGB6P18564 788 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 RPS3P23396 243 aaKnown RBP eCLIP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 ALDH4A1P30038 563 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 SLC1A2P43004 574 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 GPR3P46089 330 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 ARCN1P48444 511 aaKnown RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 GPLD1P80108 840 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 INSM1Q01101 510 aaPredicted RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 FOXK2Q01167 660 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 PLOD1Q02809 727 aaPredicted RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 KRT33BQ14525 404 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 METRNLQ641Q3 311 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 ABRAXAS1Q6UWZ7 409 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 RBM44Q6ZP01 1051 aaKnown RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 FAM83HQ6ZRV2 1179 aaPredicted RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CEP128Q6ZU80 1094 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 ZNF438Q7Z4V0 828 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 SPRED1Q7Z699 444 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CCDC25Q86WR0 208 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 ANKMY2Q8IV38 441 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 RBM12BQ8IXT5 1001 aaKnown RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 ZBED8Q8IZ13 594 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 AGGF1Q8N302 714 aaeCLIP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 FBXO36Q8NEA4 188 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 GSDMBQ8TAX9 411 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 PYROXD1Q8WU10 500 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 ART4Q93070 314 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 TMEM159Q96B96 161 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CERS2Q96G23 380 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 PWWP2AQ96N64 755 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CARD6Q9BX69 1037 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 PHACTR1Q9C0D0 580 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 WWP1Q9H0M0 922 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 LRRN3Q9H3W5 708 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 EPB41L5Q9HCM4 733 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 SAYSD1Q9NPB0 183 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 FAM114A2Q9NRY5 505 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 IARS2Q9NSE4 1012 aaKnown RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 IMP3Q9NV31 184 aaKnown RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 GRHL1Q9NZI5 618 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CPNE7Q9UBL6 633 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 MTRF1LQ9UGC7 380 aaKnown RBP10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CLCA2Q9UQC9 943 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 HEBP2Q9Y5Z4 205 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 TEX264Q9Y6I9 313 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 PRSS21Q9Y6M0 314 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 SPTBN4Q9H254 2564 aa10.78□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 PRR19A6NJB7 356 aa10.77□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 OR52A4PA6NMU1 304 aa10.77□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 E7ESA3 106 aa10.77□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 DUX1O43812 170 aa10.77□□□□□ -0.69
CSPG4P2Y-201ENST00000306853 MT-CO3P00414 261 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms