RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 HLA-DPA1P20036 260 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 NR1D1P20393 614 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 CES1P23141 567 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 MGAT1P26572 445 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 LSSP48449 732 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 KIAA1024LP59773 190 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 TLE3Q04726 772 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 PRKD1Q15139 912 aaPredicted RBP5.54□□□□□ -1.52
PATL1-201ENST00000300146 BBS9Q3SYG4 887 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 DNTTIP2Q5QJE6 756 aaKnown RBP5.54□□□□□ -1.52
PATL1-201ENST00000300146 HENMT1Q5T8I9 393 aaKnown RBP5.54□□□□□ -1.52
PATL1-201ENST00000300146 KDELC1Q6UW63 502 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 CCDC25Q86WR0 208 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 CACNA2D3Q8IZS8 1091 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 DCBLD1Q8N8Z6 715 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 GALNT6Q8NCL4 622 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 MR1Q95460 341 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 CLIP3Q96DZ5 547 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 FCRL5Q96RD9 977 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 GBA3Q9H227 469 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 RETREG1Q9H6L5 497 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 MAGEE1Q9HCI5 957 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 STARD5Q9NSY2 213 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 ZNF624Q9P2J8 865 aaPredicted RBP5.54□□□□□ -1.52
PATL1-201ENST00000300146 PLXNA2O75051 1894 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 USP27XA6NNY8 438 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 NDUFS3O75489 264 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 UBXN7O94888 489 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 HMGCLP35914 325 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 SUOXP51687 545 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 CFHR1Q03591 330 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 MPP3Q13368 585 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 TBC1D25Q3MII6 688 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 FASTKD1Q53R41 847 aaKnown RBP5.54□□□□□ -1.52
PATL1-201ENST00000300146 C11orf63Q6NUN7 778 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 TMC3Q7Z5M5 1100 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 COG1Q8WTW3 980 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 MFSD3Q96ES6 412 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 CCNL2Q96S94 520 aaPredicted RBP5.54□□□□□ -1.52
PATL1-201ENST00000300146 INSM2Q96T92 566 aaPredicted RBP5.54□□□□□ -1.52
PATL1-201ENST00000300146 SEMA4CQ9C0C4 833 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 SRMSQ9H3Y6 488 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 TRHDEQ9UKU6 1024 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 TMPRSS11EQ9UL52 423 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 NENFQ9UMX5 172 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 DGKBQ9Y6T7 804 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 POLEQ07864 2286 aa5.54□□□□□ -1.52
PATL1-201ENST00000300146 CTAGE9A4FU28 777 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 SLC9B1P1A6NJY1 282 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 TNFRSF10CO14798 259 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 ZW10O43264 779 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 KIF5CO60282 957 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 SERPIND1P05546 499 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 BRAFP15056 766 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 RPL22P35268 128 aaKnown RBP5.53□□□□□ -1.52
PATL1-201ENST00000300146 ITGA9Q13797 1035 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 GPR19Q15760 415 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 FAAH2Q6GMR7 532 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 TMEM126BQ8IUX1 230 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 ZNF547Q8IVP9 402 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 GPR150Q8NGU9 434 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 GPBAR1Q8TDU6 330 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.53□□□□□ -1.52
PATL1-201ENST00000300146 CDKN2AIPNLQ96HQ2 116 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 ZCCHC2Q9C0B9 1178 aaKnown RBP5.53□□□□□ -1.52
PATL1-201ENST00000300146 CARD9Q9H257 536 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 USP29Q9HBJ7 922 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 SAMD15Q9P1V8 674 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 SLC17A4Q9Y2C5 497 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 PRSS21Q9Y6M0 314 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 TCRBV7S3A2A0A539 114 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 C5orf60A6NFR6 353 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 MIF4GDA9UHW6 222 aaKnown RBP5.53□□□□□ -1.52
PATL1-201ENST00000300146 NUDT21O43809 227 aaKnown RBP5.53□□□□□ -1.52
PATL1-201ENST00000300146 HLTFQ14527 1009 aaKnown RBP eCLIP5.53□□□□□ -1.52
PATL1-201ENST00000300146 SKIDA1Q1XH10 827 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 DCAF12Q5T6F0 453 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 TMEM26Q6ZUK4 368 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 ZNF605Q86T29 641 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 TMEM139Q8IV31 216 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 SFRP1Q8N474 314 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 TRAM1L1Q8N609 369 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 LRRC57Q8N9N7 239 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 SIDT2Q8NBJ9 832 aaKnown RBP5.53□□□□□ -1.52
PATL1-201ENST00000300146 TTC13Q8NBP0 860 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 TFGQ92734 400 aaPredicted RBP5.53□□□□□ -1.52
PATL1-201ENST00000300146 TMEM159Q96B96 161 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 ZNF669Q96BR6 464 aaPredicted RBP5.53□□□□□ -1.52
PATL1-201ENST00000300146 CFAP36Q96G28 342 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 MFRPQ9BY79 579 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 DPH5Q9H2P9 285 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 BFARQ9NZS9 450 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 POLQO75417 2590 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 RELNP78509 3460 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 TSPAN11A1L157 253 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 E5RI56 91 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 GOT2P00505 430 aaKnown RBP5.53□□□□□ -1.52
PATL1-201ENST00000300146 WT1P19544 449 aaPredicted RBP5.53□□□□□ -1.52
PATL1-201ENST00000300146 TCN2P20062 427 aa5.53□□□□□ -1.52
PATL1-201ENST00000300146 CTBP1Q13363 440 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms