RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 COX4I1P13073 169 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 ZNF12P17014 697 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 GTF2BQ00403 316 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 RBM39Q14498 530 aaKnown RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 PDK4Q16654 411 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 NOXRED1Q6NXP6 359 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 CRELD2Q6UXH1 353 aaPredicted RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 FIBCD1Q8N539 461 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 OR8H1Q8NGG4 311 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 MCFD2Q8NI22 146 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 MRIQ9BWK5 157 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 SNTG1Q9NSN8 517 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 HIF1ANQ9NWT6 349 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 CLTCQ00610 1675 aaKnown RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 OR6C75A6NL08 312 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 H0YJX3 145 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 WNT10BO00744 389 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 SUV39H1O43463 412 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 FSBPO95073 299 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 ZBTB11O95625 1053 aaPredicted RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 ZNF35P13682 527 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 MAGP20916 626 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 ARCN1P48444 511 aaKnown RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 TMBIM6P55061 237 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 S100A10P60903 97 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 CA9Q16790 459 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 OR5M3Q8NGP4 307 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 LRRC19Q9H756 370 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 PNPLA3Q9NST1 481 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 ADAM18Q9Y3Q7 739 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 MAU2Q9Y6X3 613 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 LIASO43766 372 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 CBX6O95503 412 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 MAGEA11P43364 429 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 PSMD8P48556 350 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 ZNF132P52740 706 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 C15orf59Q2T9L4 293 aaPredicted RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 LYSMD3Q7Z3D4 306 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 FAM71AQ8IYT1 594 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 PCDH20Q8N6Y1 951 aaKnown RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 UBXN10Q96LJ8 280 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 ZSWIM3Q96MP5 696 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 IL12RB2Q99665 862 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 SHOXO15266 292 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 MPPED1O15442 326 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 ZSCAN5DPP0CG00 497 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 HGFP14210 728 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 AVPR1BP47901 424 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 NR0B1P51843 470 aaKnown RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 TBC1D15Q8TC07 691 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 EBNA1BP2Q99848 306 aaKnown RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 TLE6Q9H808 572 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 SEC61A2Q9H9S3 476 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 MAGEL2Q9UJ55 1249 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 GMEB2Q9UKD1 530 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 SLC15A5A6NIM6 579 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 E7EQ34 232 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 PEX11AO75192 247 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 RNASEH2AO75792 299 aaKnown RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 PAPSS2O95340 614 aaPredicted RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 GSTT2BP0CG30 244 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 SDC2P34741 201 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 MAP3K8P41279 467 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 CDK9P50750 372 aaKnown RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 SLC8B1Q6J4K2 584 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 SPESP1Q6UW49 350 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 BBS12Q6ZW61 710 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 VSIG10LQ86VR7 867 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 ZNF280BQ86YH2 543 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 PHF13Q86YI8 300 aaPredicted RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 C7orf61Q8IZ16 206 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 RBM18Q96H35 190 aaKnown RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 DUSP9Q99956 384 aaKnown RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 HOPXQ9BPY8 73 aaPredicted RBP11.94□□□□□ -0.5
PCF11-201ENST00000298281 SLC39A3Q9BRY0 314 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 MUC13Q9H3R2 512 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 SMURF2Q9HAU4 748 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 ERVK-5Q9HDB9 667 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 TREM1Q9NP99 234 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 B3GAT2Q9NPZ5 323 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 DHRS12A0PJE2 317 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 UNC5CO95185 931 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 PYDC1Q8WXC3 89 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 IRF2BPLQ9H1B7 796 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 SGK2Q9HBY8 427 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 DERAQ9Y315 318 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 PMF1-BGLAPU3KQ54 211 aa11.94□□□□□ -0.5
PCF11-201ENST00000298281 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 NEDD8-MDP1E9PL57 170 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 AZIN1O14977 448 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 MATKP42679 507 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 RTP1P59025 263 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 DUSP4Q13115 394 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 UBAP2Q5T6F2 1119 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 CREG2Q8IUH2 290 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 SMG7Q92540 1137 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 PCDHB1Q9Y5F3 818 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 DIP2AQ14689 1571 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 E2F2Q14209 437 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms