RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 EID2BQ96D98 161 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 ING2Q9H160 280 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 TUBA8Q9NY65 449 aaPredicted RBP24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 PKD2L2Q9NZM6 624 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 MOXD2PA6NHM9 499 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 UPK1AO00322 258 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 ADAM12O43184 909 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 KCNH1O95259 989 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 HNRNPCP07910 306 aaKnown RBP eCLIP24.04■■□□□ 1.445e-7■■□□□ 14.1
SPTSSA-201ENST00000298130 ADARB1P78563 741 aaKnown RBP24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 PDCD4Q53EL6 469 aaKnown RBP24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 ATXN7L2Q5T6C5 722 aaPredicted RBP24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 ZC3H7AQ8IWR0 971 aaKnown RBP24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 FNDC8Q8TC99 324 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 CGREF1Q99674 301 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 BDH2Q9BUT1 245 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 THUMPD3Q9BV44 507 aaKnown RBP24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 IL37Q9NZH6 218 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 PCDHB9Q9Y5E1 797 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 J3QRK9 145 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 OR7A17O14581 309 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 RHOCP08134 193 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 ENO2P09104 434 aaPredicted RBP24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 ATF6P18850 670 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 PRKACGP22612 351 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 MTHFRP42898 656 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 ARSFP54793 590 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 AASDHQ4L235 1098 aaPredicted RBP24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 SLC24A5Q71RS6 500 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 FBXL8Q96CD0 374 aa24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 NUSAP1Q9BXS6 441 aaKnown RBP24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 OLA1Q9NTK5 396 aaKnown RBP24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 PTBP2Q9UKA9 531 aaKnown RBP24.04■■□□□ 1.44
SPTSSA-201ENST00000298130 H3BNC9 293 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 FAM151BQ6UXP7 276 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 PHACTR4Q8IZ21 702 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 ISG20Q96AZ6 181 aaKnown RBP24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 ABCG8Q9H221 673 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 IPPKQ9H8X2 491 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 RRAGCQ9HB90 399 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 KANSL1LA0AUZ9 987 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 FAM92AA1XBS5 289 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 KLK8O60259 260 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 B3GALT4O96024 378 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 CR2P20023 1033 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 HTR1EP28566 365 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 FKBP1BP68106 108 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 GPR162Q16538 588 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 RNF219Q5W0B1 726 aaPredicted RBP24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 ABI1Q8IZP0 508 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 KRTCAP2Q8N6L1 136 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 LKAAEAR1Q8TD35 194 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 BPIFB1Q8TDL5 484 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 TANKQ92844 425 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 SMPD4Q9NXE4 827 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 U3KQV3 271 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 VWA8A3KMH1 1905 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 CKBP12277 381 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 SLC44A4Q53GD3 710 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 MBOAT1Q6ZNC8 495 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 RIMKLAQ8IXN7 391 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 OSCP1Q8WVF1 389 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 MAGEH1Q9H213 219 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 CD320Q9NPF0 282 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 ZIM2Q9NZV7 527 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 LIMD1Q9UGP4 676 aa24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 FCF1Q9Y324 198 aaKnown RBP24.03■■□□□ 1.44
SPTSSA-201ENST00000298130 LSM1O15116 133 aaKnown RBP24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 GKP32189 559 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 TRIM71Q2Q1W2 868 aaKnown RBP24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 LDLRAP1Q5SW96 308 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 MFSD14CQ5VZR4 134 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 TXNDC11Q6PKC3 985 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 MILR1Q7Z6M3 343 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 RASAL3Q86YV0 1011 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 PAPD5Q8NDF8 572 aaKnown RBP24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 ADAMTS16Q8TE57 1224 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 AURKBQ96GD4 344 aaPredicted RBP24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 ITCHQ96J02 903 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 TM6SF2Q9BZW4 377 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 PLGRKTQ9HBL7 147 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 ZNF711Q9Y462 761 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 H0Y626 953 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 TRIM16O95361 564 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 TTPAP49638 278 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 CAP1Q01518 475 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 GTF2H2Q13888 395 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 GTF2H2CQ6P1K8 395 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 USP51Q70EK9 711 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 ZIC5Q96T25 663 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 CIPCQ9C0C6 399 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 TOR3AQ9H497 397 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 ZNHIT2Q9UHR6 403 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 NEUROG3Q9Y4Z2 214 aa24.02■■□□□ 1.44
SPTSSA-201ENST00000298130 MKI67P46013 3256 aaKnown RBP24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 TRIM64A6NGJ6 449 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 SEPT4O43236 478 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 MAN1A2O60476 641 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 PIGAP37287 484 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms