RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 PSMA4P25789 261 aaKnown RBP13.34□□□□□ -0.27
TTC39B-201ENST00000297615 IST1P53990 364 aa13.34□□□□□ -0.27
TTC39B-201ENST00000297615 RPL38P63173 70 aaKnown RBP13.34□□□□□ -0.27
TTC39B-201ENST00000297615 ELAVL2Q12926 359 aaKnown RBP13.34□□□□□ -0.27
TTC39B-201ENST00000297615 TMED1Q13445 227 aa13.34□□□□□ -0.27
TTC39B-201ENST00000297615 LAPTM4AQ15012 233 aa13.34□□□□□ -0.27
TTC39B-201ENST00000297615 ADAMTS19Q8TE59 1207 aa13.34□□□□□ -0.27
TTC39B-201ENST00000297615 KLF16Q9BXK1 252 aaPredicted RBP13.34□□□□□ -0.27
TTC39B-201ENST00000297615 NLE1Q9NVX2 485 aaPredicted RBP13.34□□□□□ -0.27
TTC39B-201ENST00000297615 SUN2Q9UH99 717 aa13.34□□□□□ -0.27
TTC39B-201ENST00000297615 ITM2BQ9Y287 266 aa13.34□□□□□ -0.27
TTC39B-201ENST00000297615 PRKAB1Q9Y478 270 aa13.34□□□□□ -0.27
TTC39B-201ENST00000297615 CCDC154A6NI56 674 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 ARPC2O15144 300 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 HSPA1AP0DMV8 641 aaKnown RBP13.33□□□□□ -0.27
TTC39B-201ENST00000297615 HSPA1BP0DMV9 641 aaKnown RBP13.33□□□□□ -0.27
TTC39B-201ENST00000297615 CHRM1P11229 460 aaPredicted RBP13.33□□□□□ -0.27
TTC39B-201ENST00000297615 SLC6A2P23975 617 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 METAP1P53582 386 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 LIPEQ05469 1076 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 MESP2Q0VG99 397 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 IRF5Q13568 498 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 LAPTM5Q13571 262 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 NEDD8Q15843 81 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 GTDC1Q4AE62 458 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 RFTN2Q52LD8 501 aaPredicted RBP13.33□□□□□ -0.27
TTC39B-201ENST00000297615 LPCAT2Q7L5N7 544 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 CLVS1Q8IUQ0 354 aaPredicted RBP13.33□□□□□ -0.27
TTC39B-201ENST00000297615 CCDC117Q8IWD4 279 aaPredicted RBP13.33□□□□□ -0.27
TTC39B-201ENST00000297615 KRTCAP2Q8N6L1 136 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 KLHL23Q8NBE8 558 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 MRPS31Q92665 395 aaKnown RBP13.33□□□□□ -0.27
TTC39B-201ENST00000297615 MYO19Q96H55 970 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 SLC46A2Q9BY10 475 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 IPPKQ9H8X2 491 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 PFDN4Q9NQP4 134 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 SMOXQ9NWM0 555 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 WWOXQ9NZC7 414 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 TMEM181Q9P2C4 612 aa13.33□□□□□ -0.27
TTC39B-201ENST00000297615 B4GAT1O43505 415 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 ZNF189O75820 626 aaPredicted RBP13.33□□□□□ -0.28
TTC39B-201ENST00000297615 G6PDP11413 515 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 ADSLP30566 484 aaPredicted RBP13.33□□□□□ -0.28
TTC39B-201ENST00000297615 SLC7A1P30825 629 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 ERVFC1P60507 584 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 LCP2Q13094 533 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 ABRAXAS2Q15018 415 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 TAF1AQ15573 450 aaPredicted RBP13.33□□□□□ -0.28
TTC39B-201ENST00000297615 ANKRD34AQ69YU3 496 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 AFTPHQ6ULP2 937 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 B3GNT6Q6ZMB0 384 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 CMTR2Q8IYT2 770 aaKnown RBP13.33□□□□□ -0.28
TTC39B-201ENST00000297615 GPR26Q8NDV2 337 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 OR4F6Q8NGB9 312 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 PHF24Q9UPV7 400 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 COQ6Q9Y2Z9 468 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 U3KQV3 271 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 CNTRLQ7Z7A1 2325 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 WASH3PC4AMC7 463 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 RSL1D1O76021 490 aaKnown RBP13.33□□□□□ -0.28
TTC39B-201ENST00000297615 CHEK2O96017 543 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 CYBBP04839 570 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 ZDHHC11BP0C7U3 371 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 HMOX2P30519 316 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 GSK3BP49841 420 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 ABRQ12979 859 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 LSAMPQ13449 338 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 RFTN1Q14699 578 aaPredicted RBP13.33□□□□□ -0.28
TTC39B-201ENST00000297615 DPY19L3Q6ZPD9 716 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 BEND5Q7L4P6 421 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 PHACTR4Q8IZ21 702 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 CLEC4FQ8N1N0 589 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 SCML4Q8N228 414 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 PNPT1Q8TCS8 783 aaKnown RBP13.33□□□□□ -0.28
TTC39B-201ENST00000297615 MRPL9Q9BYD2 267 aaKnown RBP13.33□□□□□ -0.28
TTC39B-201ENST00000297615 ALG2Q9H553 416 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 LHX3Q9UBR4 397 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 MYRFQ9Y2G1 1151 aa13.33□□□□□ -0.28
TTC39B-201ENST00000297615 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.33□□□□□ -0.28
TTC39B-201ENST00000297615 ILVBLA1L0T0 632 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 FAM92AA1XBS5 289 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 GBAP04062 536 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 PYGLP06737 847 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 BPIP17213 487 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 NR4A1P22736 598 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 IL12AP29459 219 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 HLA-FP30511 346 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 POLD2P49005 469 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 INHBCP55103 352 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 RING1Q06587 406 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 SELPLGQ14242 412 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 LRRC66Q68CR7 880 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
TTC39B-201ENST00000297615 NLRC5Q86WI3 1866 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 SFTPA1Q8IWL2 248 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 PARP8Q8N3A8 854 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 ZNF784Q8NCA9 323 aaPredicted RBP13.32□□□□□ -0.28
TTC39B-201ENST00000297615 SLAIN1Q8ND83 568 aa13.32□□□□□ -0.28
TTC39B-201ENST00000297615 SNRNP27Q8WVK2 155 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms