RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CLYBLQ8N0X4 340 aa21.04■□□□□ 0.96
SOX17-201ENST00000297316 C19orf60Q96EN9 201 aa21.04■□□□□ 0.96
SOX17-201ENST00000297316 TUBB1Q9H4B7 451 aa21.04■□□□□ 0.96
SOX17-201ENST00000297316 ZDHHC3Q9NYG2 299 aa21.04■□□□□ 0.96
SOX17-201ENST00000297316 COQ6Q9Y2Z9 468 aa21.04■□□□□ 0.96
SOX17-201ENST00000297316 F5P12259 2224 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 SYCE1LA8MT33 242 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 ARNTLO00327 626 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 NUDT2P50583 147 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 PTPN5P54829 565 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 CYLC2Q14093 348 aaPredicted RBP21.03■□□□□ 0.96
SOX17-201ENST00000297316 C18orf21Q32NC0 220 aaPredicted RBP21.03■□□□□ 0.96
SOX17-201ENST00000297316 GK5Q6ZS86 529 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 LARP4Q71RC2 724 aaKnown RBP eCLIP21.03■□□□□ 0.96
SOX17-201ENST00000297316 GPSM1Q86YR5 675 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 RP9Q8TA86 221 aaKnown RBP21.03■□□□□ 0.96
SOX17-201ENST00000297316 OR8D1Q8WZ84 308 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 COPS8Q99627 209 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 RIOK2Q9BVS4 552 aaKnown RBP21.03■□□□□ 0.96
SOX17-201ENST00000297316 TRMT61BQ9BVS5 477 aaKnown RBP21.03■□□□□ 0.96
SOX17-201ENST00000297316 FAM83DQ9H4H8 585 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 DCLRE1BQ9H816 532 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 PACSIN3Q9UKS6 424 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 AZIN1O14977 448 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 SLC22A2O15244 555 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 FGF4P08620 206 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 GPRC6AQ5T6X5 926 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 LYPLAL1Q5VWZ2 237 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 KANK2Q63ZY3 851 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 ANKS6Q68DC2 871 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 CHRDL2Q6WN34 429 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 LIPIQ6XZB0 460 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 MMAAQ8IVH4 418 aaKnown RBP21.03■□□□□ 0.96
SOX17-201ENST00000297316 DTX3LQ8TDB6 740 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 EIF2B4Q9UI10 523 aaKnown RBP21.03■□□□□ 0.96
SOX17-201ENST00000297316 ZNF225Q9UK10 706 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 PCTPQ9UKL6 214 aa21.03■□□□□ 0.96
SOX17-201ENST00000297316 FADS2P1A8MWK0 482 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 PIP5K1BO14986 540 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 PRNPP04156 253 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 EPHX1P07099 455 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 TBL3Q12788 808 aaKnown RBP21.02■□□□□ 0.96
SOX17-201ENST00000297316 LCP2Q13094 533 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 TGFBIQ15582 683 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 C1orf146Q5VVC0 180 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 SBSNQ6UWP8 590 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 MACC1Q6ZN28 852 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 ZNF483Q8TF39 744 aaPredicted RBP21.02■□□□□ 0.96
SOX17-201ENST00000297316 TWIST2Q8WVJ9 160 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 RIPOR3Q96MK2 946 aa21.02■□□□□ 0.96
SOX17-201ENST00000297316 STX16-NPEPL1H3BU86 382 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 STX16O14662 325 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 UBDO15205 165 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 CIB2O75838 187 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 ELFN1P0C7U0 828 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 ADSLP30566 484 aaPredicted RBP21.01■□□□□ 0.95
SOX17-201ENST00000297316 NSG1P42857 185 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 ACTR3P61158 418 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 ADGRE1Q14246 886 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 ELAVL3Q14576 367 aaKnown RBP21.01■□□□□ 0.95
SOX17-201ENST00000297316 HPS6Q86YV9 775 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 SUSD6Q92537 303 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 C1QTNF3Q9BXJ4 246 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 CD274Q9NZQ7 290 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 BTRCQ9Y297 605 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 CCNT2O60583 730 aaKnown RBP21.01■□□□□ 0.95
SOX17-201ENST00000297316 ALDOCP09972 364 aaKnown RBP21.01■□□□□ 0.95
SOX17-201ENST00000297316 CCNG1P51959 295 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 HERC3Q15034 1050 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 ACOX1Q15067 660 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 TRMT5Q32P41 509 aaKnown RBP21.01■□□□□ 0.95
SOX17-201ENST00000297316 ITPRIPL2Q3MIP1 535 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 SYVN1Q86TM6 617 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 CCDC124Q96CT7 223 aaKnown RBP21.01■□□□□ 0.95
SOX17-201ENST00000297316 PDLIM5Q96HC4 596 aaKnown RBP21.01■□□□□ 0.95
SOX17-201ENST00000297316 MSLNLQ96KJ4 702 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 ASB2Q96Q27 587 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 AKTIPQ9H8T0 292 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 PRSS16Q9NQE7 514 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 THAP10Q9P2Z0 257 aaPredicted RBP21.01■□□□□ 0.95
SOX17-201ENST00000297316 MTCH2Q9Y6C9 303 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 TRIOBPQ9H2D6 2365 aa21.01■□□□□ 0.95
SOX17-201ENST00000297316 HENMT1Q5T8I9 393 aaKnown RBP21■□□□□ 0.95
SOX17-201ENST00000297316 FBXL19Q6PCT2 694 aa21■□□□□ 0.95
SOX17-201ENST00000297316 TECPR1Q7Z6L1 1165 aa21■□□□□ 0.95
SOX17-201ENST00000297316 DSELQ8IZU8 1212 aa21■□□□□ 0.95
SOX17-201ENST00000297316 CFAP61Q8NHU2 1237 aa21■□□□□ 0.95
SOX17-201ENST00000297316 NPAS2Q99743 824 aa21■□□□□ 0.95
SOX17-201ENST00000297316 TTYH1Q9H313 450 aaPredicted RBP21■□□□□ 0.95
SOX17-201ENST00000297316 ADAMTS6Q9UKP5 1117 aa21■□□□□ 0.95
SOX17-201ENST00000297316 TIMM22Q9Y584 194 aa21■□□□□ 0.95
SOX17-201ENST00000297316 DOCK9Q9BZ29 2069 aa21■□□□□ 0.95
SOX17-201ENST00000297316 IGLV3-16A0A075B6K0 115 aa21■□□□□ 0.95
SOX17-201ENST00000297316 E2F3O00716 465 aa21■□□□□ 0.95
SOX17-201ENST00000297316 LMNAP02545 664 aaKnown RBP21■□□□□ 0.95
SOX17-201ENST00000297316 ITGB7P26010 798 aa21■□□□□ 0.95
SOX17-201ENST00000297316 AKT1P31749 480 aa21■□□□□ 0.95
SOX17-201ENST00000297316 SESN3P58005 492 aa21■□□□□ 0.95
SOX17-201ENST00000297316 ERAP2Q6P179 960 aa21■□□□□ 0.95
SOX17-201ENST00000297316 ZBTB2Q8N680 514 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms