RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 SLC47A1Q96FL8 570 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 OR52E6Q96RD3 313 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 EXOSC4Q9NPD3 245 aaKnown RBP13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 NMRK2Q9NPI5 230 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 RECQL5O94762 991 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 F2P00734 622 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 FUCA1P04066 466 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 GPIP06744 558 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 PORP16435 677 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 RFTN2Q52LD8 501 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 CYBRD1Q53TN4 286 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 C6orf183Q5T699 404 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 ATXN7L2Q5T6C5 722 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 CYHR1Q6ZMK1 362 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZNF540Q8NDQ6 660 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 SEZ6LQ9BYH1 1024 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 CNOT11Q9UKZ1 510 aaKnown RBP13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 PDE10AQ9Y233 779 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZNF451Q9Y4E5 1061 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 OPRL1P41146 370 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 HALP42357 657 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 IDH2P48735 452 aaKnown RBP13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZNF157P51786 506 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 BRMS1LQ5PSV4 323 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 CYP20A1Q6UW02 462 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZNF621Q6ZSS3 439 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 SLC44A2Q8IWA5 706 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 IMP4Q96G21 291 aaKnown RBP13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 MFSD1Q9H3U5 465 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 PCDHGA8Q9Y5G5 932 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 SNX8Q9Y5X2 465 aa13.14□□□□□ -0.31
TNFRSF21-201ENST00000296861 BBIP1A8MTZ0 92 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 PKMP14618 531 aaKnown RBP13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 POU1F1P28069 291 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 RGRP47804 291 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 BCAP31P51572 246 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 HSPA14Q0VDF9 509 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 DAG1Q14118 895 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 KDELC1Q6UW63 502 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 OR2T11Q8NH01 316 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 UTP15Q8TED0 518 aaKnown RBP13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 IRGQQ8WZA9 623 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 DDX28Q9NUL7 540 aaKnown RBP13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZNF646O15015 1829 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 LDB2O43679 373 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 FAM20BO75063 409 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 RHOCP08134 193 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 MYF6P23409 242 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 ARHGDIAP52565 204 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 IHHQ14623 411 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 SLC36A3Q495N2 470 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 SPOUT1Q5T280 376 aaKnown RBP13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 AHSA2Q719I0 299 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 RAVER1Q8IY67 606 aaKnown RBP13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 EID3Q8N140 333 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 PGBD5Q8N414 524 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 OR4F6Q8NGB9 312 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 OR52J3Q8NH60 311 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 RSPH1Q8WYR4 309 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 PPP1R14BQ96C90 147 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 UBXN10Q96LJ8 280 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 CGREF1Q99674 301 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 YIPF2Q9BWQ6 316 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 EBPLQ9BY08 206 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 CLPBQ9H078 707 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 FLRT1Q9NZU1 646 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 UBA2Q9UBT2 640 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 ATP11BQ9Y2G3 1177 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 PCDHGA4Q9Y5G9 962 aa13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 OAS3Q9Y6K5 1087 aaKnown RBP13.13□□□□□ -0.31
TNFRSF21-201ENST00000296861 RASAL1O95294 804 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 SERPINA1P01009 418 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 CHRM5P08912 532 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 IL12AP29459 219 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 TGFBR1P36897 503 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 CD97P48960 835 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 SLC13A2Q13183 592 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 INAQ16352 499 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 SULT1C3Q6IMI6 304 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 KIAA1841Q6NSI8 718 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 DCDC5Q6ZRR9 648 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 HORMAD1Q86X24 394 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 HS6ST3Q8IZP7 471 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 TBC1D15Q8TC07 691 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 MCOLN3Q8TDD5 553 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 MYEOVQ96EZ4 313 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 NODALQ96S42 347 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ACBD6Q9BR61 282 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 AARSD1Q9BTE6 412 aaKnown RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 LRRC3Q9BY71 257 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 VAPAQ9P0L0 249 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 CRLS1Q9UJA2 301 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 EIF3LQ9Y262 564 aaKnown RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 COQ9O75208 318 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ANGPTL1O95841 491 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 COL6A1P12109 1028 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 MTHFD2P13995 350 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 TTKP33981 857 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 TPTEP56180 551 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 DMC1Q14565 340 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms