RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 H3BQ06 376 aaPredicted RBP15.31■□□□□ 0.04
LSM6-201ENST00000296581 PDLIM1O00151 329 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 MAP3K13O43283 966 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 SIX3O95343 332 aaPredicted RBP15.31■□□□□ 0.04
LSM6-201ENST00000296581 CCND1P24385 295 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 AKT1P31749 480 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 CCR7P32248 378 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 WASP42768 502 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 ALDH18A1P54886 795 aaKnown RBP15.31■□□□□ 0.04
LSM6-201ENST00000296581 CNTN1Q12860 1018 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 GBX1Q14549 363 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 KRT72Q14CN4 511 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 KHDC1Q4VXA5 237 aaKnown RBP15.31■□□□□ 0.04
LSM6-201ENST00000296581 LDLRAP1Q5SW96 308 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 PIP5KL1Q5T9C9 394 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 DNAJC14Q6Y2X3 702 aaPredicted RBP15.31■□□□□ 0.04
LSM6-201ENST00000296581 CYHR1Q6ZMK1 362 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 RPS27LQ71UM5 84 aaKnown RBP15.31■□□□□ 0.04
LSM6-201ENST00000296581 APLFQ8IW19 511 aaPredicted RBP15.31■□□□□ 0.04
LSM6-201ENST00000296581 GLYATL1Q969I3 302 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 SORCS3Q9UPU3 1222 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 FADS3Q9Y5Q0 445 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 UBFD1O14562 309 aaKnown RBP15.3■□□□□ 0.04
LSM6-201ENST00000296581 SGTAO43765 313 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 RECQL5O94762 991 aaPredicted RBP15.3■□□□□ 0.04
LSM6-201ENST00000296581 RPS17P08708 135 aaKnown RBP15.3■□□□□ 0.04
LSM6-201ENST00000296581 C6P13671 934 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 AOAHP28039 575 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 DRD3P35462 400 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 MXRA7P84157 204 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 TGFBIQ15582 683 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 PPP1R3AQ16821 1122 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 SLC9B1Q4ZJI4 515 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 SH2D4BQ5SQS7 431 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 FAR2Q96K12 515 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 TRIM4Q9C037 500 aa15.3■□□□□ 0.04
LSM6-201ENST00000296581 C2CD4DB7Z1M9 353 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 SOD1P00441 154 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 ENO3P13929 434 aaPredicted RBP15.29■□□□□ 0.04
LSM6-201ENST00000296581 MSH3P20585 1137 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 EEF1DP29692 281 aaKnown RBP15.29■□□□□ 0.04
LSM6-201ENST00000296581 DPTQ07507 201 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 CST6Q15828 149 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 C2orf27AQ580R0 203 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 NLRP8Q86W28 1048 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 NUS1Q96E22 293 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 DTNBP1Q96EV8 351 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 TUBB6Q9BUF5 446 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 MMADHCQ9H3L0 296 aaPredicted RBP15.29■□□□□ 0.04
LSM6-201ENST00000296581 TNFRSF12AQ9NP84 129 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 COQ6Q9Y2Z9 468 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 ANKRD12Q6UB98 2062 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 SZT2Q5T011 3432 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 LRRC14BA6NHZ5 514 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 CAPN14A8MX76 684 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 QSOX1O00391 747 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 MMP20O60882 483 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 MTX2O75431 263 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 ADH1BP00325 375 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 TARSP26639 723 aaKnown RBP15.29■□□□□ 0.04
LSM6-201ENST00000296581 TIE1P35590 1138 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 CCNG1P51959 295 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 SEC13P55735 322 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 ANKS6Q68DC2 871 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 ASRGL1Q7L266 308 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 DET1Q7L5Y6 550 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 RALGPS2Q86X27 583 aaPredicted RBP15.29■□□□□ 0.04
LSM6-201ENST00000296581 AADATQ8N5Z0 425 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 KCNV2Q8TDN2 545 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 GABRG3Q99928 467 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 CCDC106Q9BWC9 280 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 FAM126AQ9BYI3 521 aaPredicted RBP15.29■□□□□ 0.04
LSM6-201ENST00000296581 CD274Q9NZQ7 290 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 CNOT6Q9ULM6 557 aaKnown RBP15.29■□□□□ 0.04
LSM6-201ENST00000296581 OARD1Q9Y530 152 aa15.29■□□□□ 0.04
LSM6-201ENST00000296581 EIF4E1BA6NMX2 242 aaKnown RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 TMEM233B4DJY2 109 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 NEMP1O14524 444 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 MID1O15344 667 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 AP1G1O43747 822 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 SNX2O60749 519 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 RNASEH1O60930 286 aaKnown RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 CBX6O95503 412 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 C5AR1P21730 350 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 CDH13P55290 713 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 PLEKHS1Q5SXH7 462 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 METTL21CQ5VZV1 264 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 AFAP1L2Q8N4X5 818 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 PDPRQ8NCN5 879 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 ERLEC1Q96DZ1 483 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 PTCD3Q96EY7 689 aaKnown RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 NUF2Q9BZD4 464 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 TCF7L2Q9NQB0 619 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 ARL8BQ9NVJ2 186 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 ARMCX1Q9P291 453 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 NCF1BA6NI72 391 aaPredicted RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 TRPC5OSA6NMA1 111 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 NCF1CA8MVU1 366 aaPredicted RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 KPNA5O15131 536 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 NUAK1O60285 661 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms