RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 MS4A4AQ96JQ5 239 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 NKX2-4Q9H2Z4 354 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 ANKRD66B4E2M5 251 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 TEX28O15482 410 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 CPSF7Q8N684 471 aaKnown RBP17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 DDHD1Q8NEL9 900 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 VPS35Q96QK1 796 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 KXD1Q9BQD3 176 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 HERC2P3Q9BVR0 1158 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 OSER1Q9NX31 292 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 MAN2B1O00754 1011 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 MCEMP1Q8IX19 187 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 IQCKQ8N0W5 287 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 XAGE5Q8WWM1 108 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 B4DGG1 531 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 B3GALT2O43825 422 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 OR10H3O60404 316 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 ASTE1Q2TB18 679 aaPredicted RBP17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 ERICH5Q6P6B1 374 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 RORBQ92753 470 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 RETREG1Q9H6L5 497 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 SPHK2Q9NRA0 654 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 C3orf18Q9UK00 162 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 FBXW2Q9UKT8 454 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 MCIDASD6RGH6 385 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 PRPS2P11908 318 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 ALDH4A1P30038 563 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 PTGIRP43119 386 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 UBAP2LQ14157 1087 aaKnown RBP17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 IL23RQ5VWK5 629 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 C12orf76Q8N812 135 aaPredicted RBP17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 COPS7AQ9UBW8 275 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 PTSQ03393 145 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 SIRPB2Q5JXA9 342 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 OR2T12Q8NG77 320 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 SMARCD2Q92925 531 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 C1orf74Q96LT6 269 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 OR6B1O95007 311 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 ZCCHC18P0CG32 403 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 HOXD13P35453 343 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 LARS2Q15031 903 aaKnown RBP17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 PLEKHG6Q3KR16 790 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 ZNF783Q6ZMS7 281 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLC9A6Q92581 669 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 Q96MT0 163 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 PRPF19Q9UMS4 504 aaKnown RBP17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 MMP20O60882 483 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 SIN3BO75182 1162 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 UBXN7O94888 489 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 UNC5CO95185 931 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 TSPAN19P0C672 248 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 GSTM5P46439 218 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 SOX4Q06945 474 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 GALNT2Q10471 571 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 ARL13AQ5H913 290 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 DEF8Q6ZN54 512 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 ARMCX6Q7L4S7 300 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 PROSER1Q86XN7 944 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 MOSPD2Q8NHP6 518 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 CENPIQ92674 756 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 HIC2Q96JB3 615 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 CCM2Q9BSQ5 444 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 TFB2MQ9H5Q4 396 aaKnown RBP17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 PRDM8Q9NQV8 689 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 SAGE1Q9NXZ1 904 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 MAGEL2Q9UJ55 1249 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 CNTN6Q9UQ52 1028 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 GNEQ9Y223 722 aaKnown RBP17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 STX11O75558 287 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 CHRNA6Q15825 494 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 SEMA6AQ9H2E6 1030 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 WDR55Q9H6Y2 383 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
CDC42EP3-201ENST00000295324 PLIN3O60664 434 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 PRAMEF11O60813 436 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 UAP1L1Q3KQV9 507 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 PLEKHG4Q58EX7 1191 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 SPESP1Q6UW49 350 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 NEK10Q6ZWH5 1172 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 TMC8Q8IU68 726 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 ANKRD27Q96NW4 1050 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 XYLT2Q9H1B5 865 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 EIF2B4Q9UI10 523 aaKnown RBP17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 MYH2Q9UKX2 1941 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 POLR2JP52435 117 aaKnown RBP17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 TAS2R41P59536 307 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 TAS2R50P59544 299 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 C1QTNF8P60827 252 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 PRR5P85299 388 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 FAM220AQ7Z4H9 259 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 WDR6Q9NNW5 1121 aaKnown RBP17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 SEC14L3Q9UDX4 400 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 SMIM31A0A1B0GVY4 71 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 TMEM150CB9EJG8 249 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 CAPN1P07384 714 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 KBTBD6Q86V97 674 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 TDRPQ86YL5 185 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 C8orf59Q8N0T1 100 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 DEPDC4Q8N2C3 294 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 AGAP2Q99490 1192 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms