RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PTSQ03393 145 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 SREBF2Q12772 1141 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 CEACAM7Q14002 265 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 STARD3Q14849 445 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 FAM126AQ9BYI3 521 aaPredicted RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 GKN1Q9NS71 199 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 RAI2Q9Y5P3 530 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 A0A1W2PRG6 482 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 NDST3O95803 873 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 CHRM5P08912 532 aaPredicted RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 EFNA1P20827 205 aaPredicted RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 TACR2P21452 398 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 GLYATQ6IB77 296 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 ANKLE1Q8NAG6 615 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 SMG8Q8ND04 991 aaKnown RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 SHANK3Q9BYB0 1731 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 FAM124BQ9H5Z6 455 aaPredicted RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 EMCNQ9ULC0 261 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 MLYCDO95822 493 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 C1RP00736 705 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 ALDH9A1P49189 494 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 KCNQ1P51787 676 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 MTPNP58546 118 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 CDC42P60953 191 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 DNASE1L3Q13609 305 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 SIRPB2Q5JXA9 342 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 SMYD1Q8NB12 490 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 IRGQQ8WZA9 623 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 C1GALT1C1Q96EU7 318 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 MOV10Q9HCE1 1003 aaKnown RBP12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 ZBTB26Q9HCK0 441 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 POLE3Q9NRF9 147 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 STON1Q9Y6Q2 735 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 FAM189A1O60320 539 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 NPHS1O60500 1241 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 SNX4O95219 450 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 LRG1P02750 347 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 PRKAR1AP10644 381 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 STARP49675 285 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 TUBA4AP68366 448 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 PRSS55Q6UWB4 352 aaPredicted RBP12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 TMEM135Q86UB9 458 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 ANKRD46Q86W74 232 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 C10orf53Q8N6V4 93 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 DIRAS2Q96HU8 199 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 MAF1Q9H063 256 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 CCSER2Q9H7U1 834 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 AMBNQ9NP70 447 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 GALPQ9UBC7 116 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 BAIAP2Q9UQB8 552 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 LYVE1Q9Y5Y7 322 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 ZFP37Q9Y6Q3 630 aaPredicted RBP12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 PTGESO14684 152 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 GPR32O75388 356 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 STX11O75558 287 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 EPN2O95208 641 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 CD68P34810 354 aaPredicted RBP12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 CLCN2P51788 898 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 MXD1Q05195 221 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 HIST2H2ACQ16777 129 aaPredicted RBP12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 ZNF789Q5FWF6 425 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 HIST2H2AA3Q6FI13 130 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 TAF8Q7Z7C8 310 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 GRPEL2Q8TAA5 225 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 PNPT1Q8TCS8 783 aaKnown RBP12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 RAB2BQ8WUD1 216 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 STYXQ8WUJ0 223 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 TTYH1Q9H313 450 aaPredicted RBP12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 CLCA2Q9UQC9 943 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 EVPLQ92817 2033 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 SCN9AQ15858 1988 aa12.4□□□□□ -0.42
SLC6A1-201ENST00000287766 KNL1Q8NG31 2342 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 A0A1W2PQ67 120 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 GLTPD2A6NH11 291 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 SOCS7O14512 581 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 RGS14O43566 566 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 THRBP10828 461 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 HOXB8P17481 243 aaPredicted RBP12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 NOS3P29474 1203 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 POLR2JP52435 117 aaKnown RBP12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 CREB5Q02930 508 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 RNASE12Q5GAN4 147 aaKnown RBP12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 ATAD3BQ5T9A4 648 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 TUBA3EQ6PEY2 450 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 RTP4Q96DX8 246 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 MIEF1Q9NQG6 463 aa12.4□□□□□ -0.43
SLC6A1-201ENST00000287766 ZCWPW2A0A1B0GU75 182 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 CDC7O00311 574 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 AREL1O15033 823 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 AIREO43918 545 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 VPS4BO75351 444 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 CLTBP09497 229 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 HAPLN1P10915 354 aaPredicted RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 MLLT6P55198 1093 aaPredicted RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 LCP2Q13094 533 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 ATXN7L2Q5T6C5 722 aaPredicted RBP12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC34A3Q8N130 599 aa12.39□□□□□ -0.43
SLC6A1-201ENST00000287766 CENPSQ8N2Z9 138 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms