RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PYDC2Q56P42 97 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 PTCHD4Q6ZW05 846 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 AMZ2Q86W34 360 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 HID1Q8IV36 788 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 ZZZ3Q8IYH5 903 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 SVOPLQ8N434 492 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 ELOA3Q8NG57 546 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 BHLHE41Q9C0J9 482 aaPredicted RBP4.03□□□□□ -1.77
SCN3A-201ENST00000283254 OSBPL2Q9H1P3 480 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 TRIM39Q9HCM9 518 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 EIF2B3Q9NR50 452 aaKnown RBP4.03□□□□□ -1.77
SCN3A-201ENST00000283254 SNX15Q9NRS6 342 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 ARHGAP20Q9P2F6 1191 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 L1RE1Q9UN81 338 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 BAIAP2Q9UQB8 552 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 PSMD10O75832 226 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 FABP3P05413 133 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 CPN2P22792 545 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 ITPKAP23677 461 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 SSTR1P30872 391 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 CSTF2P33240 577 aaKnown RBP eCLIP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 DHPSP49366 369 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 GKN2Q86XP6 184 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 ECHDC2Q86YB7 292 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 SDR16C5Q8N3Y7 309 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 TMEM156Q8N614 296 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 CAMKVQ8NCB2 501 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 FLCNQ8NFG4 579 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 OR2L8Q8NGY9 312 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 XAGE5Q8WWM1 108 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 KAT2AQ92830 837 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 HDAC10Q969S8 669 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 TP53INP1Q96A56 240 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 ROPN1LQ96C74 230 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 SLC47A1Q96FL8 570 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 FCRL4Q96PJ5 515 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 LGMNQ99538 433 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 FAM83CQ9BQN1 747 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 ACAT2Q9BWD1 397 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 TOR4AQ9NXH8 423 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 RDH8Q9NYR8 311 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 DDX20Q9UHI6 824 aaKnown RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 PHF24Q9UPV7 400 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 PCDHGA3Q9Y5H0 932 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 hCG_1818297A0A087WSY0 165 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 MMP3P08254 477 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 NUDT17P0C025 328 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 GSTT2BP0CG30 244 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 ARF4P18085 180 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 CCNCP24863 283 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 HRH2P25021 359 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 EIF2B2P49770 351 aaKnown RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 C1QTNF8P60827 252 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 DECR1Q16698 335 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 TEX44Q53QW1 395 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 LRIF1Q5T3J3 769 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 RNASEH2BQ5TBB1 312 aaKnown RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 PIK3R6Q5UE93 754 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 CRELD2Q6UXH1 353 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 RBM23Q86U06 439 aaKnown RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 CRYBG2Q8N1P7 616 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 OR56A1Q8NGH5 318 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 OR4C6Q8NH72 309 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 CYP2W1Q8TAV3 490 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 FCGR1BQ92637 280 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 GAL3ST3Q96A11 431 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 NECTIN4Q96NY8 510 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 AGXT2Q9BYV1 514 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 DNAJC18Q9H819 358 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 ENY2Q9NPA8 101 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 PAK6Q9NQU5 681 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 C15orf41Q9Y2V0 281 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 CLCA3PQ9Y6N3 262 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 COMMD3-BMI1R4GMX3 469 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 DIP2BQ9P265 1576 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 FAM172BPA6NC97 362 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 PPEF2O14830 753 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 DBIP07108 87 aaKnown RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 C8AP07357 584 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 CSNK2A2P19784 350 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 DPP6P42658 865 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 MTHFRP42898 656 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 NDST2P52849 883 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 SOX10P56693 466 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 DSG2Q14126 1118 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 POM121L1PQ3SYA9 428 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 SPRYD7Q5W111 196 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 ZC3H14Q6PJT7 736 aaKnown RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 C3orf67Q6ZVT6 689 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 TMPRSS11BQ86T26 416 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 PLCZ1Q86YW0 608 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 BPIFB6Q8NFQ5 453 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 AENQ8WTP8 325 aaKnown RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 MTMR8Q96EF0 704 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 C17orf62Q9BQA9 187 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 MRPS30Q9NP92 439 aaKnown RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 DNMT3AQ9Y6K1 912 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-201ENST00000283254 TEX13CA0A0J9YWL9 993 aa4.02□□□□□ -1.77
SCN3A-201ENST00000283254 BTN3A3O00478 584 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms