RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 CT55Q8WUE5 264 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 KLHL6Q8WZ60 621 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 UBXN4Q92575 508 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 C12orf66Q96MD2 445 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 MAP3K3Q99759 626 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 FERMT1Q9BQL6 677 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 TWSG1Q9GZX9 223 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 RAB33BQ9H082 229 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 GBA3Q9H227 469 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 SMOXQ9NWM0 555 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 MAN2B2Q9Y2E5 1009 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
CD44-203ENST00000278386 ALG6Q9Y672 507 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 KCNMB2Q9Y691 235 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 HECTD1Q9ULT8 2610 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 PTPN13Q12923 2485 aa12.49□□□□□ -0.41
CD44-203ENST00000278386 UBA6A0AVT1 1052 aaPredicted RBP12.48□□□□□ -0.41
CD44-203ENST00000278386 TLCD2A6NGC4 264 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 MKRN2OSH3BPM6 223 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 GAPDHSO14556 408 aaPredicted RBP12.48□□□□□ -0.41
CD44-203ENST00000278386 RFPL1O75677 317 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 ZRANB2O95218 330 aaKnown RBP eCLIP12.48□□□□□ -0.41
CD44-203ENST00000278386 SLC35G4P0C7Q5 338 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 FOLR1P15328 257 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 CA5AP35218 305 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 GEMP55040 296 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 ACY1Q03154 408 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 PTPRCAPQ14761 206 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 TCEAL1Q15170 157 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 ARMC6Q6NXE6 501 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 TMEM135Q86UB9 458 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 OOSP2Q86WS3 158 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 DTX3LQ8TDB6 740 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 NAT14Q8WUY8 206 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 ZNF514Q96K75 400 aaPredicted RBP12.48□□□□□ -0.41
CD44-203ENST00000278386 HEMGNQ9BXL5 484 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 WWP1Q9H0M0 922 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 LHX9Q9NQ69 397 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 SOHLH2Q9NX45 425 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 TRHDEQ9UKU6 1024 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 PADI1Q9ULC6 663 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 ARL5AQ9Y689 179 aa12.48□□□□□ -0.41
CD44-203ENST00000278386 PIPSLA2A3N6 862 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 OR5K3A6NET4 321 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 GOLGA6L3A6NEY3 463 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 C2orf81A6NN90 581 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 CYSRT1A8MQ03 144 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 APOC4-APOC2K7ER74 178 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 CREG1O75629 220 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 ANXA9O76027 345 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 AGTP01019 485 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 APOC2P02655 101 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 FURINP09958 794 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 LPOP22079 712 aaPredicted RBP12.47□□□□□ -0.41
CD44-203ENST00000278386 CTNNA2P26232 953 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 RBL1P28749 1068 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 ARCN1P48444 511 aaKnown RBP12.47□□□□□ -0.41
CD44-203ENST00000278386 HADHBP55084 474 aaKnown RBP12.47□□□□□ -0.41
CD44-203ENST00000278386 KLRB1Q12918 225 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 KRT33BQ14525 404 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 IGFBP7Q16270 282 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 SKOR2Q2VWA4 1001 aaPredicted RBP12.47□□□□□ -0.41
CD44-203ENST00000278386 PWWP2BQ6NUJ5 590 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 C11orf63Q6NUN7 778 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 CERS6Q6ZMG9 384 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 DAAM2Q86T65 1068 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 RCOR2Q8IZ40 523 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 OR4K2Q8NGD2 314 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 ZNF398Q8TD17 642 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 KRT35Q92764 455 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 SLC41A2Q96JW4 573 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 CD180Q99467 661 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 APOL2Q9BQE5 337 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 ACTL8Q9H568 366 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 ASB8Q9H765 288 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 C10orf88Q9H8K7 445 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 LUC7LQ9NQ29 371 aaKnown RBP12.47□□□□□ -0.41
CD44-203ENST00000278386 FGF21Q9NSA1 209 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 HRASLS2Q9NWW9 162 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 FKBPLQ9UIM3 349 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 CRLS1Q9UJA2 301 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 TFR2Q9UP52 801 aa12.47□□□□□ -0.41
CD44-203ENST00000278386 DNMT3AQ9Y6K1 912 aaPredicted RBP12.47□□□□□ -0.41
CD44-203ENST00000278386 NBASA2RRP1 2371 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 C21orf140B9A014 251 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 CPNE3O75131 537 aaKnown RBP12.46□□□□□ -0.41
CD44-203ENST00000278386 SRP72O76094 671 aaKnown RBP12.46□□□□□ -0.41
CD44-203ENST00000278386 STK10O94804 968 aaKnown RBP12.46□□□□□ -0.41
CD44-203ENST00000278386 NTRK1P04629 796 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 RALBP11234 206 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 PSMB4P28070 264 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 PMS2P54278 862 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 RPS18P62269 152 aaKnown RBP12.46□□□□□ -0.41
CD44-203ENST00000278386 FOXK1P85037 733 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 PDE1BQ01064 536 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 OTUD4Q01804 1114 aaKnown RBP12.46□□□□□ -0.41
CD44-203ENST00000278386 OLIG2Q13516 323 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 PRPSAP1Q14558 356 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 GSE1Q14687 1217 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 SPA17Q15506 151 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms