RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 C12orf29Q8N999 325 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 SNIP1Q8TAD8 396 aaKnown RBP13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 POF1BQ8WVV4 589 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 MIOSQ9NXC5 875 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 SEC14L4Q9UDX3 406 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 RPL36Q9Y3U8 105 aaKnown RBP13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 TRPV2Q9Y5S1 764 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 PARP4Q9UKK3 1724 aaKnown RBP13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 OR6C70A6NIJ9 312 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 SLC9A3P48764 834 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 MAB21L1Q13394 359 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 TMEM214Q6NUQ4 689 aaKnown RBP13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 SYCE2Q6PIF2 218 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 DENND1CQ8IV53 801 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 PLD5Q8N7P1 536 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 MKL1Q969V6 931 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 SPON1Q9HCB6 807 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 PTBP2Q9UKA9 531 aaKnown RBP13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 C3P01024 1663 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 TNS2Q63HR2 1409 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 TRAV19A0A0A6YYK7 116 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 YDJCA8MPS7 323 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 ATG13O75143 517 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 NCK1P16333 377 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 FMO3P31513 532 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 CDH12P55289 794 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 CLCQ05315 142 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 MOGQ16653 247 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 IL23RQ5VWK5 629 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 GALNTL5Q7Z4T8 443 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 PIGZQ86VD9 579 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 ZBTB2Q8N680 514 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 NUSAP1Q9BXS6 441 aaKnown RBP13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 ZNF639Q9UID6 485 aa13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 RBM7Q9Y580 266 aaKnown RBP13.48□□□□□ -0.25
NOTCH1-201ENST00000277541 RBM34P42696 430 aaKnown RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 PTGIRP43119 386 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 TOMM20Q15388 145 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 FAM174BQ3ZCQ3 159 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 GPR158Q5T848 1215 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 CCDC28AQ8IWP9 274 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 DCSTAMPQ9H295 470 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 RBM47A0AV96 593 aaKnown RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 AQP12BA6NM10 295 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 CXCR3P49682 368 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 MVKQ03426 396 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 CBFBQ13951 182 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 USF2Q15853 346 aaPredicted RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 PLEKHG4Q58EX7 1191 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 RAP1GAP2Q684P5 730 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 AQP12AQ8IXF9 295 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 ZNF567Q8N184 647 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 DRAXINQ8NBI3 349 aaPredicted RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 VANGL1Q8TAA9 524 aaPredicted RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 C9orf43Q8TAL5 461 aaPredicted RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 NEK7Q8TDX7 302 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 TRAPPC12Q8WVT3 735 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 RIC1Q4ADV7 1423 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 FOXO6A8MYZ6 492 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 GIMD1P0DJR0 217 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 ECHS1P30084 290 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 PPP3R1P63098 170 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 ZNF829Q3KNS6 432 aaPredicted RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 TMEM110Q86TL2 294 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 LRRN4Q8WUT4 740 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 GTPBP3Q969Y2 492 aaKnown RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 NSMCE3Q96MG7 304 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 LAMA4Q16363 1823 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 C12orf43Q96C57 262 aaKnown RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 TSSK3Q96PN8 268 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 MCMBPQ9BTE3 642 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 MARK1Q9P0L2 795 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 SLC7A8Q9UHI5 535 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 NRCAMQ92823 1304 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 PXDNQ92626 1479 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 CACNG1Q06432 222 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 DRICH1Q6PGQ1 229 aaPredicted RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 OR10H4Q8NGA5 316 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 HSPBAP1Q96EW2 488 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 APOLD1Q96LR9 279 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 GLOD4Q9HC38 313 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 DNAJC11Q9NVH1 559 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 UCKL1Q9NWZ5 548 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 SPATA31A6Q5VVP1 1343 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 PAGE1O75459 146 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 C8BP07358 591 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 PIRTP0C851 137 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 HADHBP55084 474 aaKnown RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 LIX1Q8N485 282 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 KCTD15Q96SI1 283 aaPredicted RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 NKX1-2Q9UD57 310 aaPredicted RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 RGS17Q9UGC6 210 aaPredicted RBP13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 PTCH2Q9Y6C5 1203 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 I3L521 148 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 MAGEA12P43365 314 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 PRR5P85299 388 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 SLC22A16Q86VW1 577 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 COPS8Q99627 209 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 SLC30A2Q9BRI3 323 aa13.47□□□□□ -0.25
NOTCH1-201ENST00000277541 TCRBV7S2A1N4TA0A589 114 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms