RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 SUSD6Q92537 303 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 MTERF1Q99551 399 aaKnown RBP14.15□□□□□ -0.14
TMEM47-201ENST00000275954 TBC1D30Q9Y2I9 924 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 PCDHB1Q9Y5F3 818 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 FAM186AA6NE01 2351 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 FFAR2O15552 330 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 COCHO43405 550 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 RECQL5O94762 991 aaPredicted RBP14.15□□□□□ -0.14
TMEM47-201ENST00000275954 ATP1A4Q13733 1029 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 SIM2Q14190 667 aaPredicted RBP14.15□□□□□ -0.14
TMEM47-201ENST00000275954 CHRNA6Q15825 494 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 ZNF549Q6P9A3 640 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 RANBP10Q6VN20 620 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 UMODL1-AS1Q8N2C9 162 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 MIR1-1HGQ9H1L0 117 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 DNAH12Q6ZR08 3092 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 RGS5O15539 181 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 BCL10O95999 233 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 CDH15P55291 814 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 UFM1P61960 85 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 ADHFE1Q8IWW8 467 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 C8orf59Q8N0T1 100 aaPredicted RBP14.15□□□□□ -0.14
TMEM47-201ENST00000275954 TFB2MQ9H5Q4 396 aaKnown RBP14.15□□□□□ -0.14
TMEM47-201ENST00000275954 ASF1AQ9Y294 204 aa14.15□□□□□ -0.14
TMEM47-201ENST00000275954 ILVBLA1L0T0 632 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 G3V2L1 256 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 K7ERQ8 282 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 GJB3O75712 270 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 SERPINB10P48595 397 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 NEK2P51955 445 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 CYP4F2P78329 520 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 UBE3AQ05086 875 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 FGD3Q5JSP0 725 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 CYS1Q717R9 158 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 TMCO5AQ8N6Q1 288 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 MYLIPQ8WY64 445 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 HHIPL1Q96JK4 782 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 FAM83DQ9H4H8 585 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 PNPLA3Q9NST1 481 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 KCNE2Q9Y6J6 123 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 TIMP1P01033 207 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 ILF2Q12905 390 aaKnown RBP14.14□□□□□ -0.15
TMEM47-201ENST00000275954 CEACAM7Q14002 265 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 PLA2G4EQ3MJ16 856 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 ACBD5Q5T8D3 534 aaPredicted RBP14.14□□□□□ -0.15
TMEM47-201ENST00000275954 ABRAXAS1Q6UWZ7 409 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 SPATA19Q7Z5L4 167 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 ZC3H7AQ8IWR0 971 aaKnown RBP14.14□□□□□ -0.15
TMEM47-201ENST00000275954 CSGALNACT1Q8TDX6 532 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 KLK6Q92876 244 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 RAD9AQ99638 391 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 REEP1Q9H902 201 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 SMIM31A0A1B0GVY4 71 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 BBIP1A8MTZ0 92 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 SLC28A1O00337 649 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 FAM20BO75063 409 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 CLIC3O95833 236 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 S1PR4O95977 384 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 ALDH6A1Q02252 535 aaKnown RBP14.14□□□□□ -0.15
TMEM47-201ENST00000275954 CNTN1Q12860 1018 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 CHIT1Q13231 466 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 GRB7Q14451 532 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 MAPK11Q15759 364 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 LIX1Q8N485 282 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 DDHD1Q8NEL9 900 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 ZNF461Q8TAF7 563 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 C1orf21Q9H246 121 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 TLR9Q9NR96 1032 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 TMEM30AQ9NV96 361 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 KCTD5Q9NXV2 234 aa14.14□□□□□ -0.15
TMEM47-201ENST00000275954 C2orf78A6NCI8 922 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 ZNF37AP17032 561 aaPredicted RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 EPORP19235 508 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 WDR5P61964 334 aaKnown RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 AP1S1P61966 158 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 CSTF3Q12996 717 aaKnown RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 TECRLQ5HYJ1 363 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 TMPRSS11BQ86T26 416 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 CHID1Q9BWS9 393 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 CLK4Q9HAZ1 481 aaKnown RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 INTS10Q9NVR2 710 aaKnown RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 CACNA2D2Q9NY47 1150 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 ADAMTS6Q9UKP5 1117 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 TMCC3Q9ULS5 477 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 SAMHD1Q9Y3Z3 626 aaKnown RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 INPPL1O15357 1258 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 GJA8P48165 433 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 MTTPP55157 894 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 ROR2Q01974 943 aaKnown RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 ZNF33AQ06730 810 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 ALKAL1Q6UXT8 129 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 RTN4RL1Q86UN2 441 aaPredicted RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 RGL4Q8IZJ4 473 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 ENDOVQ8N8Q3 282 aaKnown RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 RORBQ92753 470 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 DGCR14Q96DF8 476 aaKnown RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 SORT1Q99523 831 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 ZCCHC2Q9C0B9 1178 aaKnown RBP14.13□□□□□ -0.15
TMEM47-201ENST00000275954 KATNBL1Q9H079 304 aa14.13□□□□□ -0.15
TMEM47-201ENST00000275954 LCHNA4D1U4 455 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms