RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 KERAO60938 352 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 LRATO95237 230 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 ME2P23368 584 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 HERVK_113P63132 956 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 SATB1Q01826 763 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 KRT72Q14CN4 511 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 TRMT5Q32P41 509 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 CEP97Q8IW35 865 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 EFCAB3Q8N7B9 438 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 RP9Q8TA86 221 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 WBP2Q969T9 261 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 ZNF317Q96PQ6 595 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 KCTD14Q9BQ13 255 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 ERVK-6Q9BXR3 956 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 CARS2Q9HA77 564 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 IGLV3-10A0A075B6K4 115 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 PLK4O00444 970 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 MUSKO15146 869 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 PSMA4P25789 261 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 AKT2P31751 481 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 SLC6A11P48066 632 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 KLF10Q13118 480 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 RRM2BQ7LG56 351 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 TAF8Q7Z7C8 310 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 TAGAPQ8N103 731 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 CCDC138Q96M89 665 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 DPEP2Q9H4A9 486 aa14.26□□□□□ -0.13
PDLIM2-201ENST00000265810 EIF4E1BA6NMX2 242 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 VIPP01282 170 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CYP4F2P78329 520 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 TMEM115Q12893 351 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 TP53BP2Q13625 1128 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 LSM12Q3MHD2 195 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CYP2R1Q6VVX0 501 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 RPS27LQ71UM5 84 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 C12orf66Q96MD2 445 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CCM2Q9BSQ5 444 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 GALPQ9UBC7 116 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 POLR3HQ9Y535 204 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 IDO1P14902 403 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 ZNF37AP17032 561 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 BPIP17213 487 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 GNPDA1P46926 289 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 TCTN1Q2MV58 587 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CRTC1Q6UUV9 634 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CLHC1Q8NHS4 586 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 DNAJB14Q8TBM8 379 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 APOLD1Q96LR9 279 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 TSSK3Q96PN8 268 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CDK15Q96Q40 435 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 PBX4Q9BYU1 374 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 ING2Q9H160 280 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 TRIT1Q9H3H1 467 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CD207Q9UJ71 328 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 RFX3P48380 749 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 IDH3AP50213 366 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 PCLAFQ15004 111 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 MAPKAPK3Q16644 382 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 ZNF789Q5FWF6 425 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 ZNF648Q5T619 568 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 TANGO2Q6ICL3 276 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CYP20A1Q6UW02 462 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CENPLQ8N0S6 344 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 TXNDC5Q8NBS9 432 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 ZNF689Q96CS4 500 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 MAGEB10Q96LZ2 347 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 DNAJC28Q9NX36 388 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 ADH1BP00325 375 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 UROSP10746 265 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 HPCAP84074 193 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CLEC4FQ8N1N0 589 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 DCLRE1BQ9H816 532 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 CCDC177Q9NQR7 707 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 GULP1Q9UBP9 304 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 SCOCQ9UIL1 159 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 STON1Q9Y6Q2 735 aa14.25□□□□□ -0.13
PDLIM2-201ENST00000265810 PIP5K1BO14986 540 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 SLC35E2BP0CK96 405 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 HPCAL1P37235 193 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 ACTR1BP42025 376 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 C21orf59P57076 290 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 ACTR1AP61163 376 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 PON2Q15165 354 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 ATP13A5Q4VNC0 1218 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 DGKKQ5KSL6 1271 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 ADGRG2Q8IZP9 1017 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 PGBD5Q8N414 524 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 MRPL38Q96DV4 380 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 TBCDQ9BTW9 1192 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 DERL2Q9GZP9 239 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 RHBGQ9H310 441 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 CCDC134Q9H6E4 229 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 FAM53CQ9NYF3 392 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 SNX13Q9Y5W8 968 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 CFAP20Q9Y6A4 193 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 WASH3PC4AMC7 463 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 NTRK1P04629 796 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 RPL10P27635 214 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 HOXA9P31269 272 aa14.24□□□□□ -0.13
PDLIM2-201ENST00000265810 SLC26A3P40879 764 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms