RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 MYOCQ99972 504 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 NTN4Q9HB63 628 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 AFF4Q9UHB7 1163 aaKnown RBP12.23□□□□□ -0.45
CHMP3-201ENST00000263856 ZNHIT2Q9UHR6 403 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 PDE10AQ9Y233 779 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 FAM234BA2RU67 622 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 TRIM43BA6NCK2 446 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 VPS4BO75351 444 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 CLPXO76031 633 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 PRKD3O94806 890 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 PORP16435 677 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-201ENST00000263856 HLA-DPA1P20036 260 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 FMO3P31513 532 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 RPL9P32969 192 aaKnown RBP12.23□□□□□ -0.45
CHMP3-201ENST00000263856 KCNQ1P51787 676 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 MAPRE1Q15691 268 aaKnown RBP12.23□□□□□ -0.45
CHMP3-201ENST00000263856 SULT1C3Q6IMI6 304 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 LINGO4Q6UY18 593 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 C16orf59Q7L2K0 433 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 ZNF467Q7Z7K2 595 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-201ENST00000263856 SLCO6A1Q86UG4 719 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 PROSER1Q86XN7 944 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 KLHDC8BQ8IXV7 354 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 TAMM41Q96BW9 452 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 ATP13A1Q9HD20 1204 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 HPS4Q9NQG7 708 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 TBCCD1Q9NVR7 557 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 MAGEL2Q9UJ55 1249 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 TLR6Q9Y2C9 796 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 ABCB7O75027 752 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 DIRAS1O95057 198 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 UMPSP11172 480 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 PSMB9P28065 219 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 TMED10P49755 219 aaKnown RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 PGS1Q32NB8 556 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 Q6ZSR9 355 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 SPARTQ8N0X7 666 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 OR4F6Q8NGB9 312 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 RHEBL1Q8TAI7 183 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 KATNAL1Q9BW62 490 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 RIBC2Q9H4K1 309 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 ACTR8Q9H981 624 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 KLQ9UEF7 1012 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 PSME2Q9UL46 239 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 GIT1Q9Y2X7 761 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 C2orf81A6NN90 581 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 C16orf96A6NNT2 1141 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 M0R3G1 203 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 TNFRSF10BO14763 440 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 STX7O15400 261 aaKnown RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 KDM1AO60341 852 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 ZNF682O95780 498 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 MLYCDO95822 493 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 RPS17P08708 135 aaKnown RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 ENO2P09104 434 aaPredicted RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 RAP2AP10114 183 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 IRF1P10914 325 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 PKMP14618 531 aaKnown RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 SLC26A3P40879 764 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 EMX2Q04743 252 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 FOXM1Q08050 763 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 TAF10Q12962 218 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 TMEM236Q5W0B7 351 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 GALNT10Q86SR1 603 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 ZNF598Q86UK7 904 aaKnown RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 MON1AQ86VX9 555 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 ZNF280BQ86YH2 543 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 TERB1Q8NA31 727 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 MDGA1Q8NFP4 955 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 DERL2Q9GZP9 239 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 CCSER2Q9H7U1 834 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 INIPQ9NRY2 104 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 FARSBQ9NSD9 589 aaKnown RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 SACM1LQ9NTJ5 587 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 TMEM248Q9NWD8 314 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 CDH7Q9ULB5 785 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 TRIM17Q9Y577 477 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 MYO16Q9Y6X6 1858 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 LOC285095A0A1B0GVY8 99 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 LCHNA4D1U4 455 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 H0Y626 953 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 MITFO75030 526 aaPredicted RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 CAPN15O75808 1086 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 TRIM16O95361 564 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 WISP3O95389 354 aaPredicted RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 S100BP04271 92 aaPredicted RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 ALPLP05186 524 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 CTPS1P17812 591 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 MAGP20916 626 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 JAK1P23458 1154 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 HTR1EP28566 365 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 IDUAP35475 653 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 MAP2K4P45985 399 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 RPS24P62847 133 aaKnown RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 CD47Q08722 323 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 SFSWAPQ12872 951 aaKnown RBP12.22□□□□□ -0.45
CHMP3-201ENST00000263856 AQP6Q13520 282 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 SERINC3Q13530 473 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 ABRAXAS2Q15018 415 aa12.22□□□□□ -0.45
CHMP3-201ENST00000263856 NKG7Q16617 165 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms