RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ANXA4P09525 319 aaPredicted RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 PKMP14618 531 aaKnown RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 STXBP1P61764 594 aaKnown RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 SMAD3P84022 425 aaKnown RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 RPL6Q02878 288 aaKnown RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 ELAVL2Q12926 359 aaKnown RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 SNAP47Q5SQN1 464 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 SYCE2Q6PIF2 218 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 ZNF563Q8TA94 476 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 CXorf40BQ96DE9 158 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 HMCESQ96FZ2 354 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 MIR1-1HGQ9H1L0 117 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 OR51V1Q9H2C8 321 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 ABHD16BQ9H3Z7 469 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 APOBEC3GQ9HC16 384 aaKnown RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 ZDHHC18Q9NUE0 388 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 UROSP10746 265 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 ZNF24P17028 368 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 RYKP34925 604 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 PCBP2Q15366 365 aaKnown RBP eCLIP11.93□□□□□ -0.51e-8■■■■■ 30.8
SMG6-201ENST00000263073 TOR1AIP1Q5JTV8 583 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 DCST1Q5T197 706 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 CPNE9Q8IYJ1 553 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 FBXL20Q96IG2 436 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 ST14Q9Y5Y6 855 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 NEDD8-MDP1E9PL57 170 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 SLC30A4O14863 429 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 GGT5P36269 586 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 SLC1A2P43004 574 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 NUDT6P53370 316 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 DNASE1L2Q92874 299 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 UBE2E3Q969T4 207 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 GPN1Q9HCN4 374 aaPredicted RBP11.93□□□□□ -0.5
SMG6-201ENST00000263073 RAI2Q9Y5P3 530 aa11.93□□□□□ -0.5
SMG6-201ENST00000263073 USP32Q8NFA0 1604 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 GLYATL1P3A0A0U1RQE8 302 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 ZSCAN5BA6NJL1 495 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 PRODHO43272 600 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 DIRAS1O95057 198 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 RPLP0P05388 317 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 CCL23P55773 120 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 TXNRD3NBQ6F5E7 133 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 FAM83AQ86UY5 434 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 MKL1Q969V6 931 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 CDADC1Q9BWV3 514 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 IDI2Q9BXS1 227 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 H7C0S8 307 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 CILPO75339 1184 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 DCDC1P59894 354 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 BNC1Q01954 994 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 PPIL2Q13356 520 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 ATP13A5Q4VNC0 1218 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 FAM91A1Q658Y4 838 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 CATSPERGQ6ZRH7 1159 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 ZMIZ2Q8NF64 920 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 GPER1Q99527 375 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 IRF2BPLQ9H1B7 796 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 TCAF1Q9Y4C2 921 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 A0A088AWK7 358 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 PRLP01236 227 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 IFNA6P05013 189 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 UGT2B4P06133 528 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 IL7RP16871 459 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 PTNP21246 168 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 ZNF10P21506 573 aaPredicted RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 CXCR2P25025 360 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 DUSP4Q13115 394 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 TIGD6Q17RP2 521 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 OR10H4Q8NGA5 316 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 SNX33Q8WV41 574 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 RERGQ96A58 199 aaPredicted RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 LHX5Q9H2C1 402 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 DHX33Q9H6R0 707 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 ARHGEF4Q9NR80 690 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 TEX28O15482 410 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 RBMXL2O75526 392 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 KRT33AO76009 404 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 STBD1O95210 358 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 SIX3O95343 332 aaPredicted RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 CLDN9O95484 217 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 PRKD1Q15139 912 aaPredicted RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 SERPINA13PQ6UXR4 307 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 OAFQ86UD1 273 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 RNF38Q9H0F5 515 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 KAT8Q9H7Z6 458 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 IFT80Q9P2H3 777 aaPredicted RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 SUCOQ9UBS9 1254 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 NOCTQ9UK39 431 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 DCCP43146 1447 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 OPN1SWP03999 348 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 MRPS6P82932 125 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 SMCO1Q147U7 214 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 SMU1Q2TAY7 513 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 CLEC12AQ5QGZ9 265 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 SLC30A6Q6NXT4 461 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 KIAA1324Q6UXG2 1013 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 PRR23BQ6ZRT6 265 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 JAZF1Q86VZ6 243 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms