RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 DEC1Q9P2X7 70 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 HIF3AQ9Y2N7 669 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 MED1Q15648 1581 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 OR6C70A6NIJ9 312 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 FZD9O00144 591 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 CPNE3O75131 537 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 ITGA2BP08514 1039 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 GSTT2BP0CG30 244 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 POU2F1P14859 743 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 GABRB2P47870 512 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 MAXP61244 160 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 ERVK-21P61565 698 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 SNRPD1P62314 119 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 UBAP2Q5T6F2 1119 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 KIAA0895Q8NCT3 520 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 FAM84AQ96KN4 292 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 DUS2Q9NX74 493 aaKnown RBP12.73□□□□□ -0.37
TTC39A-202ENST00000262676 COMMD3Q9UBI1 195 aa12.73□□□□□ -0.37
TTC39A-202ENST00000262676 DPPA5A6NC42 116 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 LIASO43766 372 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 TLR5O60602 858 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 NOS2P35228 1153 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 AFF1P51825 1210 aaKnown RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 CDH13P55290 713 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 VLDLRP98155 873 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 PRKCDQ05655 676 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 BMT2Q1RMZ1 405 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 FAM76BQ5HYJ3 339 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 ALG1LQ6GMV1 187 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 C15orf52Q6ZUT6 534 aaKnown RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 ARCQ7LC44 396 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 NPAS4Q8IUM7 802 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 EZH1Q92800 747 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 MKL1Q969V6 931 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 COQ8BQ96D53 544 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 PPM1MQ96MI6 270 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 SLC39A8Q9C0K1 460 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 MCCC2Q9HCC0 563 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 MED31Q9Y3C7 131 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 KLRG2A4D1S0 409 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 MPSTP25325 297 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 C6orf183Q5T699 404 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 EEF1DP3Q658K8 133 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 ZCCHC12Q6PEW1 402 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 TUBA3EQ6PEY2 450 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 FAM151BQ6UXP7 276 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 HDDC3Q8N4P3 179 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 NETO2Q8NC67 525 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 GPATCH1Q9BRR8 931 aaKnown RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 COMMD4Q9H0A8 199 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 IRF2BPLQ9H1B7 796 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 A0A1W2PPM1 405 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 BHMG1C9JSJ3 638 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 ITPKAP23677 461 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 CCR10P46092 362 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 CD83Q01151 205 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 ZNF155Q12901 538 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 TEAD4Q15561 434 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 AADACL4Q5VUY2 407 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 ZPBP2Q6X784 338 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 FAM183BPQ6ZVS7 135 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 KCTD8Q6ZWB6 473 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 SLITRK4Q8IW52 837 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 C7orf57Q8NEG2 295 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 CEP76Q8TAP6 659 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 AP2M1Q96CW1 435 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 FEM1AQ9BSK4 669 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 XKR8Q9H6D3 395 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 KBTBD4Q9NVX7 518 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 TAS2R14Q9NYV8 317 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 RPP38P78345 283 aaKnown RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 BLMHQ13867 455 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 QPCTQ16769 361 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 GXYLT1Q4G148 440 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 LYPLAL1Q5VWZ2 237 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 PLCZ1Q86YW0 608 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 PDPRQ8NCN5 879 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 ADAMTS15Q8TE58 950 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 XAGE5Q8WWM1 108 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 JSRP1Q96MG2 331 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 C2orf49Q9BVC5 232 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 WDR55Q9H6Y2 383 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-202ENST00000262676 TMEM27Q9HBJ8 222 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 MEIS2O14770 477 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 S100A10P60903 97 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 CDKAL1Q5VV42 579 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 KLHL35Q6PF15 583 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 ZNF570Q96NI8 536 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 ZNF700Q9H0M5 742 aa12.72□□□□□ -0.37
TTC39A-202ENST00000262676 NEURL4Q96JN8 1562 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 CNTNAP1P78357 1384 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 NOTOA8MTQ0 251 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 PGLSO95336 258 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 RPL22P35268 128 aaKnown RBP12.71□□□□□ -0.37
TTC39A-202ENST00000262676 FAM46CQ5VWP2 391 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 ZNF782Q6ZMW2 699 aaPredicted RBP12.71□□□□□ -0.37
TTC39A-202ENST00000262676 HJURPQ8NCD3 748 aaPredicted RBP12.71□□□□□ -0.37
TTC39A-202ENST00000262676 OR2T34Q8NGX1 318 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 OR2T3Q8NH03 318 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms