RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 TRAP1Q12931 704 aaKnown RBP12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 LRRC36Q1X8D7 754 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 C18orf21Q32NC0 220 aaPredicted RBP12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 VPS26BQ4G0F5 336 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 COQ5Q5HYK3 327 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 SULT1C3Q6IMI6 304 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 LETMD1Q6P1Q0 360 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 ADIPOR2Q86V24 386 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 SPATA24Q86W54 205 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 PDSS2Q86YH6 399 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 TMEM126BQ8IUX1 230 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 AHI1Q8N157 1196 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 CHCHD4Q8N4Q1 142 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 CHST14Q8NCH0 376 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 FAM156AQ8NDB6 213 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 METTL6Q8TCB7 284 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 TSPEARQ8WU66 669 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 OTUB2Q96DC9 234 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 KLHL32Q96NJ5 620 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 HOPXQ9BPY8 73 aaPredicted RBP12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 APOL5Q9BWW9 433 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 NSUN3Q9H649 340 aaKnown RBP12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 AIG1Q9NVV5 245 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 GID8Q9NWU2 228 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 TMEM181Q9P2C4 612 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 KLHL42Q9P2K6 505 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 B4GALT6Q9UBX8 382 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 ZMYM5Q9UJ78 669 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 ERVW-1Q9UQF0 538 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 ANGPTL3Q9Y5C1 460 aa12.74□□□□□ -0.37
SPTLC1-201ENST00000262554 WASH3PC4AMC7 463 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 STAMBPO95630 424 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 CYP2A6P11509 494 aaPredicted RBP12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 NNMTP40261 264 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 HSPA7P48741 367 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 SPINT3P49223 89 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 ATXN3P54252 364 aaPredicted RBP12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 DIO3P55073 304 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 FOXK1P85037 733 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 ARHGEF7Q14155 803 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 ATP13A5Q4VNC0 1218 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 ATP6AP1LQ52LC2 224 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 PRSS36Q5K4E3 855 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 BRAT1Q6PJG6 821 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 BLOC1S3Q6QNY0 202 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 SCIMPQ6UWF3 145 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 RETREG3Q86VR2 466 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 PHOSPHO2Q8TCD6 241 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 LRGUKQ96M69 825 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 CDK15Q96Q40 435 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 ACOX2Q99424 681 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 SLC2A11Q9BYW1 496 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 IPPKQ9H8X2 491 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 ZDHHC7Q9NXF8 308 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 WWOXQ9NZC7 414 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 PKD2L2Q9NZM6 624 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 CD300AQ9UGN4 299 aa12.73□□□□□ -0.37
SPTLC1-201ENST00000262554 OR7A17O14581 309 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 SLC9A3R1O14745 358 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 CAPN1P07384 714 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 C1SP09871 688 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 OR56A5P0C7T3 313 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 HSPA8P11142 646 aaKnown RBP12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 TCF3P15923 654 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 EPCAMP16422 314 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 CAPN3P20807 821 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 SLC7A2P52569 658 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 KCNK10P57789 538 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 NTHL1P78549 312 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 RALGDSQ12967 914 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 PDCD4Q53EL6 469 aaKnown RBP12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 RARS2Q5T160 578 aaKnown RBP12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 METTL2BQ6P1Q9 378 aaKnown RBP12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 KIAA0907Q7Z7F0 614 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 ADGRG2Q8IZP9 1017 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 DCBLD1Q8N8Z6 715 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 OR4F6Q8NGB9 312 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 OR2A12Q8NGT7 310 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 OR2T11Q8NH01 316 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 PPP2R3CQ969Q6 453 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 NR1H4Q96RI1 486 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 HEPHQ9BQS7 1158 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 BRINP2Q9C0B6 783 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 RDH14Q9HBH5 336 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 ELOVL2Q9NXB9 296 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 MARK1Q9P0L2 795 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 MAP10Q9P2G4 905 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 OPTCQ9UBM4 332 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 SLC8A2Q9UPR5 921 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 COLQQ9Y215 455 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 WNT6Q9Y6F9 365 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 IGLV3-16A0A075B6K0 115 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 PRORSD1PA6NEY8 169 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 EIF3FO00303 357 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 ZNF197O14709 1029 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 TAPBPO15533 448 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 SYNCRIPO60506 623 aaKnown RBP12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 SLC22A3O75751 556 aa12.72□□□□□ -0.37
SPTLC1-201ENST00000262554 ZNF30P17039 623 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms