RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 FNDC5Q8NAU1 212 aa16.31■□□□□ 0.2
VSX2-201ENST00000261980 SLC43A3Q8NBI5 491 aa16.31■□□□□ 0.2
VSX2-201ENST00000261980 GLB1L3Q8NCI6 653 aaPredicted RBP16.31■□□□□ 0.2
VSX2-201ENST00000261980 C18orf25Q96B23 403 aaPredicted RBP16.31■□□□□ 0.2
VSX2-201ENST00000261980 YME1L1Q96TA2 773 aa16.31■□□□□ 0.2
VSX2-201ENST00000261980 CHCHD6Q9BRQ6 235 aa16.31■□□□□ 0.2
VSX2-201ENST00000261980 UCKL1Q9NWZ5 548 aa16.31■□□□□ 0.2
VSX2-201ENST00000261980 NUFIP1Q9UHK0 495 aaKnown RBP16.31■□□□□ 0.2
VSX2-201ENST00000261980 CENPBD1B2RD01 187 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 FZD9O00144 591 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 APOA1P02647 267 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 UBA1P22314 1058 aaKnown RBP16.3■□□□□ 0.2
VSX2-201ENST00000261980 TRIM60Q495X7 471 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 ANKK1Q8NFD2 765 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 TRPM4Q8TD43 1214 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 FBXO9Q9UK97 447 aaPredicted RBP16.3■□□□□ 0.2
VSX2-201ENST00000261980 SYNPO2Q9UMS6 1093 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 A0A0U1RQS6 177 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 CTDSP2O14595 271 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 CSF2P04141 144 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 RAP2AP10114 183 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 IMPDH1P20839 514 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 HTR3AP46098 478 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 NPY2RP49146 381 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 CDC20Q12834 499 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 PTCHD3Q3KNS1 767 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 ATP6AP1LQ52LC2 224 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 Q6ZPB1 254 aaPredicted RBP16.3■□□□□ 0.2
VSX2-201ENST00000261980 ZNF438Q7Z4V0 828 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 RIMKLAQ8IXN7 391 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 FAM162AQ96A26 154 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 NECTIN3Q9NQS3 549 aa16.3■□□□□ 0.2
VSX2-201ENST00000261980 SDR39U1Q9NRG7 319 aaPredicted RBP16.3■□□□□ 0.2
VSX2-201ENST00000261980 A0A0G2JMP0 313 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 PCP4L1A6NKN8 68 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 MLYCDO95822 493 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 VTNP04004 478 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 AGTR2P50052 363 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 ZNF280AP59817 542 aaPredicted RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 DNAJB13P59910 316 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 CHRNEQ04844 493 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 CBX2Q14781 532 aaPredicted RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 ZMAT1Q5H9K5 638 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 HECTD2Q5U5R9 776 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 SPERTQ8NA61 448 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 PHF10Q8WUB8 498 aaKnown RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 PCNPQ8WW12 178 aaKnown RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 AURKBQ96GD4 344 aaPredicted RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 TEPSINQ96N21 525 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 TRIM54Q9BYV2 358 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 KAT8Q9H7Z6 458 aaKnown RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 ACTR8Q9H981 624 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 PGAP2Q9UHJ9 254 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 CPA4Q9UI42 421 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 ZNF639Q9UID6 485 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 ARIH1Q9Y4X5 557 aaPredicted RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 KCTD3Q9Y597 815 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 LOXHD1Q8IVV2 1947 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 SHROOM3Q8TF72 1996 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 ACKR2O00590 384 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 DFNA5O60443 496 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 SLC22A3O75751 556 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 HADHAP40939 763 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 POLR2JP52435 117 aaKnown RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 NUDT6P53370 316 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 CRISP3P54108 245 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 MAXP61244 160 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 FKBP1CQ5VVH2 108 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 DENND5AQ6IQ26 1287 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 ISCA2Q86U28 154 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 APPL2Q8NEU8 664 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 PMEPA1Q969W9 287 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 MED30Q96HR3 178 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 TMEM39AQ9NV64 488 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 CDK2AP1O14519 115 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 MAFO75444 373 aaPredicted RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 NDST3O95803 873 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 GRK5P34947 590 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 MATKP42679 507 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 KRT6CP48668 564 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 CSRP3P50461 194 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 PPP2R2BQ00005 443 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 ITKQ08881 620 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 PCID2Q5JVF3 399 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 FAM126BQ8IXS8 530 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 PPHLN1Q8NEY8 458 aaKnown RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 YIPF6Q96EC8 236 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 SLC47A1Q96FL8 570 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 VPS35Q96QK1 796 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 TBL1YQ9BQ87 522 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 FDXACB1Q9BRP7 624 aaPredicted RBP16.29■□□□□ 0.2
VSX2-201ENST00000261980 KIFC1Q9BW19 673 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 OR51E2Q9H255 320 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 RERGLQ9H628 205 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 TAS2R9Q9NYW1 312 aa16.29■□□□□ 0.2
VSX2-201ENST00000261980 NUP214P35658 2090 aaPredicted RBP16.28■□□□□ 0.2
VSX2-201ENST00000261980 ZNF638Q14966 1978 aaKnown RBP16.28■□□□□ 0.2
VSX2-201ENST00000261980 SUPT3HB4E1H0 165 aa16.28■□□□□ 0.2
VSX2-201ENST00000261980 SMLR1H3BR10 107 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms