RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 NACC2Q96BF6 587 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 MTERF1Q99551 399 aaKnown RBP9.98□□□□□ -0.81
PALB2-201ENST00000261584 CIPCQ9C0C6 399 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 NMUR1Q9HB89 426 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 KRT84Q9NSB2 600 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 ABCC13Q9NSE7 274 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 TMEM30AQ9NV96 361 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 PSME2Q9UL46 239 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 HS3ST4Q9Y661 456 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 TYW5A2RUC4 315 aaKnown RBP9.98□□□□□ -0.81
PALB2-201ENST00000261584 ARL5CA6NH57 179 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 RFXANKO14593 260 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 CLPXO76031 633 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 ITGB1P05556 798 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 GSTM1P09488 218 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 GSTT2P0CG29 244 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 GSTT2BP0CG30 244 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 SLC16A1P53985 500 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 TRIM32Q13049 653 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 LRP8Q14114 963 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 TAZQ16635 292 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 SPANXN2Q5MJ10 180 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 DOK6Q6PKX4 331 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 Q6ZPB1 254 aaPredicted RBP9.98□□□□□ -0.81
PALB2-201ENST00000261584 ISCA2Q86U28 154 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 CILP2Q8IUL8 1156 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 TTC9BQ8N6N2 239 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 FAM86B1Q8N7N1 296 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 NDNFQ8TB73 568 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 C12orf42Q96LP6 360 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 DEPDC7Q96QD5 511 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 DPH2Q9BQC3 489 aaPredicted RBP9.98□□□□□ -0.81
PALB2-201ENST00000261584 FARSBQ9NSD9 589 aaKnown RBP9.98□□□□□ -0.81
PALB2-201ENST00000261584 IKZF3Q9UKT9 509 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 CLEC4AQ9UMR7 237 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 B3GALT4O96024 378 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 CSF2P04141 144 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 CD36P16671 472 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 TCEA1P23193 301 aaKnown RBP9.98□□□□□ -0.81
PALB2-201ENST00000261584 RFX3P48380 749 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 SMARCB1Q12824 385 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 STARD3Q14849 445 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 SPCS2Q15005 226 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 CRY1Q16526 586 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 CYP20A1Q6UW02 462 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 SYT12Q8IV01 421 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 DCP1BQ8IZD4 617 aaKnown RBP9.98□□□□□ -0.81
PALB2-201ENST00000261584 CACTIN-AS1Q8N1I8 211 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 CRYBG2Q8N1P7 616 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 HM13Q8TCT9 377 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 TFAP2CQ92754 450 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 KIFC1Q9BW19 673 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 ZNF556Q9HAH1 456 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 CCM2LQ9NUG4 571 aaPredicted RBP9.98□□□□□ -0.81
PALB2-201ENST00000261584 UBA2Q9UBT2 640 aaPredicted RBP9.98□□□□□ -0.81
PALB2-201ENST00000261584 BOLA1Q9Y3E2 137 aa9.98□□□□□ -0.81
PALB2-201ENST00000261584 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.98□□□□□ -0.81
PALB2-201ENST00000261584 TMEM88BA6NKF7 163 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 TOMM70O94826 608 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 PENKP01210 267 aaPredicted RBP9.97□□□□□ -0.81
PALB2-201ENST00000261584 VIPP01282 170 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 C1QAP02745 245 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 COX7A2P14406 83 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 VARSP26640 1264 aaKnown RBP9.97□□□□□ -0.81
PALB2-201ENST00000261584 IL12AP29459 219 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 GALNT2Q10471 571 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 ZNF846Q147U1 533 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 KIAA0319Q5VV43 1072 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 PPP4R4Q6NUP7 873 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 SYVN1Q86TM6 617 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 FUNDC1Q8IVP5 155 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 RNF175Q8N4F7 328 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 C3orf58Q8NDZ4 430 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 SLCO4A1Q96BD0 722 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 SERPINB11Q96P15 392 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 SLC30A3Q99726 388 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 TNKS2Q9H2K2 1166 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 REEP1Q9H902 201 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 TRPV5Q9NQA5 729 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 MKS1Q9NXB0 559 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 FCF1Q9Y324 198 aaKnown RBP9.97□□□□□ -0.81
PALB2-201ENST00000261584 TPRKBQ9Y3C4 175 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 ELOVL7A1L3X0 281 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 PRR23AA6NEV1 266 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 CXCR6O00574 342 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 IDH3BO43837 385 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 SLC25A14O95258 325 aaPredicted RBP9.97□□□□□ -0.81
PALB2-201ENST00000261584 PROZP22891 400 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 OR1E2P47887 323 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 PLA2G16P53816 162 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 RUNX1T1Q06455 604 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 GHDCQ8N2G8 530 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 STON2Q8WXE9 905 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 PROX1Q92786 737 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 GFM1Q96RP9 751 aaKnown RBP9.97□□□□□ -0.81
PALB2-201ENST00000261584 IL4I1Q96RQ9 567 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 ABHD16BQ9H3Z7 469 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 IGSF5Q9NSI5 407 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 COQ3Q9NZJ6 369 aa9.97□□□□□ -0.81
PALB2-201ENST00000261584 ACTR3BQ9P1U1 418 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms