RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 NR1H2P55055 460 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 COL9A2Q14055 689 aaPredicted RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 CLIP4Q8N3C7 705 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 FAM13CQ8NE31 585 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 SMPDL3BQ92485 455 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 CFAP20Q9Y6A4 193 aaKnown RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 PPEF2O14830 753 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 NR2F6P10588 404 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 TIE1P35590 1138 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 SMARCB1Q12824 385 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 PIK3R6Q5UE93 754 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 UNC5BQ8IZJ1 945 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 ZNF358Q9NW07 568 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 COMMD9Q9P000 198 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 ZNF214Q9UL59 606 aaPredicted RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 COLEC10Q9Y6Z7 277 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 HAT1O14929 419 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 POP4O95707 220 aaKnown RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 L1CAMP32004 1257 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 CTSOP43234 321 aaPredicted RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 TEFMQ96QE5 360 aaKnown RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 S100A14Q9HCY8 104 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 NOCTQ9UK39 431 aaKnown RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 RHPN2P1A8MT19 583 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 TNFRSF11BO00300 401 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 NOS1APO75052 506 aaPredicted RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 ECDO95905 644 aaPredicted RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 GRIA1P42261 906 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 SLC1A2P43004 574 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 RGS8P57771 180 aaPredicted RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 SCRN3Q0VDG4 424 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 QPRTQ15274 297 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 FAM131AQ6UXB0 335 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 FSTL5Q8N475 847 aaPredicted RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 DTLQ9NZJ0 730 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 PHF11Q9UIL8 331 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 STXBP1P61764 594 aaKnown RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 LGALS3BPQ08380 585 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 SLC5A9Q2M3M2 681 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 IQCKQ8N0W5 287 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 KBTBD8Q8NFY9 601 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 PTCD2Q8WV60 388 aaKnown RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 IRGQQ8WZA9 623 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 C12orf66Q96MD2 445 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 HOPXQ9BPY8 73 aaPredicted RBP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 NEK6Q9HC98 313 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 RBPJLQ9UBG7 517 aa18.48■□□□□ 0.55
SMARCC1-201ENST00000254480 ELOVL7A1L3X0 281 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 YIPF4Q9BSR8 244 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 FAM192AQ9GZU8 254 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 RCOR3Q9P2K3 495 aaPredicted RBP18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 MYCLP1P12525 358 aaPredicted RBP18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 ZNF8P17098 575 aaPredicted RBP18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 STAT5AP42229 794 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 MC1RQ01726 317 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 SOWAHAQ2M3V2 549 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 GFOD2Q3B7J2 385 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 GALNT18Q6P9A2 607 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 ADGRD1Q6QNK2 874 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 ZNF516Q92618 1163 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 ADGRB2O60241 1585 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 AP2A2O94973 939 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 FABP3P05413 133 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 CMPK1P30085 196 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 YBEYP58557 167 aaPredicted RBP18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 MXD1Q05195 221 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 GRB14Q14449 540 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 DENND5AQ6IQ26 1287 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 FITM2Q8N6M3 262 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 LRRC57Q8N9N7 239 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 METTL21AQ8WXB1 218 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 LRTOMTQ8WZ04 291 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 BHLHE41Q9C0J9 482 aaPredicted RBP18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 NEMP2A6NFY4 417 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 SHOX2O60902 331 aaPredicted RBP18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 CDH12P55289 794 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 NAA20P61599 178 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 PPP2R2DQ66LE6 453 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 SLAIN1Q8ND83 568 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 CHID1Q9BWS9 393 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 A0A0G2JLL6 359 aaPredicted RBP18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 RBMXL2O75526 392 aaKnown RBP18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 FGF19O95750 216 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 MTPNP58546 118 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 PRRT2Q7Z6L0 340 aaPredicted RBP18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 OR2T34Q8NGX1 318 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 OR2T3Q8NH03 318 aa18.47■□□□□ 0.55
SMARCC1-201ENST00000254480 PGRMC2O15173 223 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 AOC2O75106 756 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 IFNGP01579 166 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 RPL5P46777 297 aaKnown RBP18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 ILF3Q12906 894 aaKnown RBP eCLIP18.46■□□□□ 0.554e-8■■■■□ 24.7
SMARCC1-201ENST00000254480 IL18R1Q13478 541 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 SLC30A6Q6NXT4 461 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 AHSA2Q719I0 299 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 SLCO6A1Q86UG4 719 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 TSPAN18Q96SJ8 248 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 TRMOQ9BU70 441 aa18.46■□□□□ 0.55
SMARCC1-201ENST00000254480 TULP2O00295 520 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms