RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SLC7A4O43246 635 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 RECQL5O94762 991 aaPredicted RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 ADRA1AP35348 466 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 RPS24P62847 133 aaKnown RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 MOGQ16653 247 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 SPANXN4Q5MJ08 99 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 IQSEC1Q6DN90 963 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 ZNF773Q6PK81 442 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 CNTN4Q8IWV2 1026 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 MINDY1Q8N5J2 469 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 ZNF540Q8NDQ6 660 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 FAM120BQ96EK7 910 aaKnown RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 ADAM2Q99965 735 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 YIPF2Q9BWQ6 316 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 RUBCNLQ9H714 662 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 VAPAQ9P0L0 249 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 MARCH2Q9P0N8 246 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 MTRRQ9UBK8 725 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 SPO11Q9Y5K1 396 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 KRT87PA6NCN2 255 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 GABRDO14764 452 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 LDB2O43679 373 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 NTRK1P04629 796 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 HRH2P25021 359 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 DNAJB2P25686 324 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 HLCSP50747 726 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 KCNQ1P51787 676 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 MLLT6P55198 1093 aaPredicted RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 IL2P60568 153 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 ZNF792Q3KQV3 632 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 PSAPL1Q6NUJ1 521 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 KDELC1Q6UW63 502 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 AHSA2Q719I0 299 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 SCD5Q86SK9 330 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 PIANPQ8IYJ0 282 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 PGBD5Q8N414 524 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 ZUFSPQ96AP4 578 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 CSF3RQ99062 836 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 CINPQ9BW66 212 aaPredicted RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 LRRC3Q9BY71 257 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 INTS10Q9NVR2 710 aaKnown RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 WWOXQ9NZC7 414 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 ERVK-18Q9QC07 812 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 GTF2IRD1Q9UHL9 959 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 TMA7Q9Y2S6 64 aaKnown RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 ZNF451Q9Y4E5 1061 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 CDH23Q9H251 3354 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 SMIM35A0A1B0GVV1 85 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 CLDN25C9JDP6 229 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 KPNA4O00629 521 aaPredicted RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 TBX1O43435 398 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 CAPN15O75808 1086 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 CPSF4O95639 269 aaKnown RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 RCVRNP35243 200 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 CD97P48960 835 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 NEK2P51955 445 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 AIF1P55008 147 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 CYP20A1Q6UW02 462 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 MBOAT1Q6ZNC8 495 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 MFSD2AQ8NA29 543 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 IMP4Q96G21 291 aaKnown RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 GPR63Q9BZJ6 419 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 NSUN3Q9H649 340 aaKnown RBP11.81□□□□□ -0.52
USHBP1-201ENST00000252597 IPPKQ9H8X2 491 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 PCDHGA11Q9Y5H2 935 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 GPR45Q9Y5Y3 372 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 PAPPA2Q9BXP8 1791 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 MYO9BQ13459 2157 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 RPP40O75818 363 aaKnown RBP11.8□□□□□ -0.52
USHBP1-201ENST00000252597 SEC24AO95486 1093 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 ANGPTL1O95841 491 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 SERPINA1P01009 418 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 MBL2P11226 248 aaPredicted RBP11.8□□□□□ -0.52
USHBP1-201ENST00000252597 HTR1BP28222 390 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 CA8P35219 290 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 LETMD1Q6P1Q0 360 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 AGMOQ6ZNB7 445 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 SPARTQ8N0X7 666 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 TMEM199Q8N511 208 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 KLHDC9Q8NEP7 349 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 OR52E6Q96RD3 313 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 CGREF1Q99674 301 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 TDRD1Q9BXT4 1180 aaKnown RBP11.8□□□□□ -0.52
USHBP1-201ENST00000252597 MFSD1Q9H3U5 465 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 DDX28Q9NUL7 540 aaKnown RBP11.8□□□□□ -0.52
USHBP1-201ENST00000252597 PCDHA9Q9Y5H5 950 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 SNX8Q9Y5X2 465 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 PTCH2Q9Y6C5 1203 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 ASPDHA6ND91 283 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 HHLA1C9JL84 531 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 FAM20BO75063 409 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 HSD17B1P14061 328 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 ALOX12P18054 663 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 AXLP30530 894 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 SERPINB1P30740 379 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 TTKP33981 857 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 CRYBB1P53674 252 aaPredicted RBP11.8□□□□□ -0.52
USHBP1-201ENST00000252597 ERVPABLB-1P60509 514 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 AQP6Q13520 282 aa11.8□□□□□ -0.52
USHBP1-201ENST00000252597 USP41Q3LFD5 358 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms