RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MERTKQ12866 999 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ARHGAP15Q53QZ3 475 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 CHERPQ8IWX8 916 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 SLC15A3Q8IY34 581 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ZNF615Q8N8J6 731 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 GLOD4Q9HC38 313 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 FAM53CQ9NYF3 392 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 DIP2CQ9Y2E4 1556 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 GLUD2P49448 558 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 MRPS5P82675 430 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 RAET1GQ6H3X3 334 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 USP30Q70CQ3 517 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 STON2Q8WXE9 905 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ELOVL7A1L3X0 281 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 MAGEC1O60732 1142 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 ANXA5P08758 320 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 IDO1P14902 403 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 PRKCHP24723 683 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 TAS2R39P59534 338 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 RUNDC3AQ59EK9 446 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 GPR180Q86V85 440 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 FERD3LQ96RJ6 166 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 WRAP53Q9BUR4 548 aaKnown RBP7.44□□□□□ -1.22
RIF1-201ENST00000243326 ZNF69Q9UC07 566 aa7.44□□□□□ -1.22
RIF1-201ENST00000243326 SRRM3A6NNA2 597 aaPredicted RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 VIPP01282 170 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 ALOX5P09917 674 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 DGKAP23743 735 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 PLD6Q8N2A8 252 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 PCNPQ8WW12 178 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 POLR1EQ9GZS1 481 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 IKZF2Q9UKS7 526 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 PPLO60437 1756 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 TOXO94900 526 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 FABP3P05413 133 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 CBLP22681 906 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 FAM83AQ86UY5 434 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 OOSP2Q86WS3 158 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 RPL10LQ96L21 214 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 ZYG11BQ9C0D3 744 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 GJD2Q9UKL4 321 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 AGO1Q9UL18 857 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 A6NL46 340 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 HUNKP57058 714 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 TBRG1Q3YBR2 411 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 KBTBD7Q8WVZ9 684 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 NEK6Q9HC98 313 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 FBXW2Q9UKT8 454 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 C2orf92A0A1B0GVN3 265 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 NUPL2O15504 423 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 MTX2O75431 263 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 CDH1P12830 882 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 EPHB3P54753 998 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 GRSF1Q12849 480 aaKnown RBP eCLIP7.43□□□□□ -1.22
RIF1-201ENST00000243326 CCNYL2Q5T2Q4 361 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 MEX3DQ86XN8 651 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 SLC9A6Q92581 669 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 MRPS31Q92665 395 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 C7orf26Q96N11 449 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 BRINP2Q9C0B6 783 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 SPIN1Q9Y657 262 aaPredicted RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 CD52P31358 61 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 CYP4V2Q6ZWL3 525 aaPredicted RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 ERI1Q8IV48 349 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 ARMC10Q8N2F6 343 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 SAV1Q9H4B6 383 aaPredicted RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 PCDHGA10Q9Y5H3 936 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 CCDC162PA2VCL2 907 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 HNRNPH3P31942 346 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 GTF2H2Q13888 395 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 FAM174BQ3ZCQ3 159 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 ZNF544Q6NX49 715 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 GTF2H2CQ6P1K8 395 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 CADM2Q8N3J6 435 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 ZNF317Q96PQ6 595 aaPredicted RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 CYP3A7-CYP3A51PA0A087WV96 503 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 RPP14O95059 124 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 IGSF6O95976 241 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 S100A1P23297 94 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 CLCQ05315 142 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 TREML2Q5T2D2 321 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 TNFAIP8L2Q6P589 184 aaPredicted RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 FBXL16Q8N461 479 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 RBM4BQ9BQ04 359 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 CORO1BQ9BR76 489 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 RBM4Q9BWF3 364 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 H0YGN5 161 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 IPO13O94829 963 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 SMIM10L2AP0DMW4 78 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 SMIM10L2BP0DMW5 78 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 LHCGRP22888 699 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 MAPK12P53778 367 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 BIKQ13323 160 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 PPCDCQ96CD2 204 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 ISOC1Q96CN7 298 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 CENPNQ96H22 339 aaPredicted RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 NFS1Q9Y697 457 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 FXYD6-FXYD2A0A087WZ82 144 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 UFM1P61960 85 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 E2F2Q14209 437 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms