RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 DENND6BQ8NEG7 585 aa17.18■□□□□ 0.34
HOXC6-201ENST00000243108 OR4C6Q8NH72 309 aa17.18■□□□□ 0.34
HOXC6-201ENST00000243108 GABPB2Q8TAK5 448 aaPredicted RBP17.18■□□□□ 0.34
HOXC6-201ENST00000243108 CXorf40AQ8TE69 158 aa17.18■□□□□ 0.34
HOXC6-201ENST00000243108 ECHDC3Q96DC8 303 aa17.18■□□□□ 0.34
HOXC6-201ENST00000243108 C7orf26Q96N11 449 aa17.18■□□□□ 0.34
HOXC6-201ENST00000243108 ZNF641Q96N77 438 aaPredicted RBP17.18■□□□□ 0.34
HOXC6-201ENST00000243108 NUDCD1Q96RS6 583 aa17.18■□□□□ 0.34
HOXC6-201ENST00000243108 TCEAL2Q9H3H9 227 aaPredicted RBP17.18■□□□□ 0.34
HOXC6-201ENST00000243108 CAB39LQ9H9S4 337 aa17.18■□□□□ 0.34
HOXC6-201ENST00000243108 TMEM216Q9P0N5 145 aa17.18■□□□□ 0.34
HOXC6-201ENST00000243108 BPTFQ12830 3046 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 TM7SF2O76062 418 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 CSF2P04141 144 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 NME1P15531 152 aaKnown RBP17.17■□□□□ 0.34
HOXC6-201ENST00000243108 CKMT2P17540 419 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 CD151P48509 253 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 OCRLQ01968 901 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 CHI3L2Q15782 390 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 GALNTL6Q49A17 601 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 LMNTD2Q8IXW0 634 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 PLD6Q8N2A8 252 aaKnown RBP17.17■□□□□ 0.34
HOXC6-201ENST00000243108 BRSK1Q8TDC3 778 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 TUBGCP5Q96RT8 1024 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 SCUBE2Q9NQ36 999 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 SLC39A10Q9ULF5 831 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 ZFYVE26Q68DK2 2539 aa17.17■□□□□ 0.34
HOXC6-201ENST00000243108 LY6G6EA0A0G2JKS1 128 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 TRAFD1O14545 582 aaPredicted RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 C6P13671 934 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 ALDH3A1P30838 453 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 MMP12P39900 470 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 SCNN1BP51168 640 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 TMPRSS15P98073 1019 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 GALNT3Q14435 633 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 PCLAFQ15004 111 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 IRF4Q15306 451 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 WSCD2Q2TBF2 565 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 FASTKD1Q53R41 847 aaKnown RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 PARGQ86W56 976 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 GALNT15Q8N3T1 639 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 ZNF548Q8NEK5 533 aaPredicted RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 TRIM55Q9BYV6 548 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 NPHS2Q9NP85 383 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 SLC12A4Q9UP95 1085 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 U3KQA8 63 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 LOC400499M0QZD8 3231 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 FAM95CA0A1B0GW59 222 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 TRABD2BA6NFA1 517 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 C1SP09871 688 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 FGF3P11487 239 aaPredicted RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 ACP1P24666 158 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 GMPRP36959 345 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 LEPRP48357 1165 aaKnown RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 LIG3P49916 1009 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 SUOXP51687 545 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 ARSDP51689 593 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 ACTN3Q08043 901 aaPredicted RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 RALGDSQ12967 914 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 USP10Q14694 798 aaKnown RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 BRAT1Q6PJG6 821 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 PROSER1Q86XN7 944 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 RBFAQ8N0V3 343 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 FITM2Q8N6M3 262 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 THOC1Q96FV9 657 aaKnown RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 TDRD1Q9BXT4 1180 aaKnown RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 ATP13A3Q9H7F0 1226 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 ZNF358Q9NW07 568 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 COPG2Q9UBF2 871 aa17.16■□□□□ 0.34
HOXC6-201ENST00000243108 RALYQ9UKM9 306 aaKnown RBP17.16■□□□□ 0.34
HOXC6-201ENST00000243108 K7ESM1 405 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 SCAMP1O15126 338 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 UBOX5O94941 541 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 PRLP01236 227 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 SLC35E2BP0CK96 405 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 COL6A2P12110 1019 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 GM2AP17900 193 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 XPAP23025 273 aaPredicted RBP17.15■□□□□ 0.34
HOXC6-201ENST00000243108 PSMA3P25788 255 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 SCTRP47872 440 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 IRF9Q00978 393 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 ELP6Q0PNE2 266 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 RALGPS1Q5JS13 557 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 TMPRSS12Q86WS5 348 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 CILP2Q8IUL8 1156 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 RFWD2Q8NHY2 731 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 HDAC10Q969S8 669 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 APOLD1Q96LR9 279 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 CHKBQ9Y259 395 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 KCTD3Q9Y597 815 aa17.15■□□□□ 0.34
HOXC6-201ENST00000243108 COL27A1Q8IZC6 1860 aaPredicted RBP17.14■□□□□ 0.34
HOXC6-201ENST00000243108 DCTN3O75935 186 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 HAUS5O94927 633 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 JUNDP17535 347 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 SERPINA4P29622 427 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 RAB10P61026 200 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 HNRNPKP61978 463 aaKnown RBP eCLIP17.14■□□□□ 0.33
HOXC6-201ENST00000243108 POU4F1Q01851 419 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms