RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 DOCK3Q8IZD9 2030 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 RGSL1A5PLK6 1076 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 CASTOR2A6NHX0 329 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 DCXO43602 365 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 PEX1O43933 1283 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 B3GAT3O94766 335 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 CELF2O95319 508 aaKnown RBP7.85□□□□□ -1.15
CXCR4-201ENST00000241393 PAPSS2O95340 614 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-201ENST00000241393 SLC2A3P11169 496 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 STMN1P16949 149 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 NCF2P19878 526 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-201ENST00000241393 CD151P48509 253 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 CLCN2P51788 898 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 LINC00310P59036 64 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 SATB1Q01826 763 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 RFTN1Q14699 578 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-201ENST00000241393 MLC1Q15049 377 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 DLG2Q15700 870 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 KCNA10Q16322 511 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 LRRC8EQ6NSJ5 796 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 RWDD4Q6NW29 188 aaKnown RBP7.85□□□□□ -1.15
CXCR4-201ENST00000241393 MSANTD2Q6P1R3 559 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 CD300LGQ6UXG3 332 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 RANBP10Q6VN20 620 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 DHDDSQ86SQ9 333 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 TMEM126BQ8IUX1 230 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 RAVER1Q8IY67 606 aaKnown RBP7.85□□□□□ -1.15
CXCR4-201ENST00000241393 ARHGAP18Q8N392 663 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 FBXW8Q8N3Y1 598 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 RTL3Q8N8U3 475 aaKnown RBP7.85□□□□□ -1.15
CXCR4-201ENST00000241393 RSPH1Q8WYR4 309 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 PPP2R3CQ969Q6 453 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 CCDC126Q96EE4 140 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 ATXN7L3BQ96GX2 97 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 CELF6Q96J87 481 aaKnown RBP7.85□□□□□ -1.15
CXCR4-201ENST00000241393 FAR2Q96K12 515 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 SERPINB11Q96P15 392 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 ECSITQ9BQ95 431 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 MRPL57Q9BQC6 102 aaKnown RBP7.85□□□□□ -1.15
CXCR4-201ENST00000241393 APOL2Q9BQE5 337 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 SYT3Q9BQG1 590 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 MRPL46Q9H2W6 279 aaKnown RBP7.85□□□□□ -1.15
CXCR4-201ENST00000241393 ZNF385DQ9H6B1 395 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 CAB39LQ9H9S4 337 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 VPS45Q9NRW7 570 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 TREX1Q9NSU2 369 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 OSER1Q9NX31 292 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 HACD3Q9P035 362 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 PDP2Q9P2J9 529 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 SNX10Q9Y5X0 201 aa7.85□□□□□ -1.15
CXCR4-201ENST00000241393 TRPM7Q96QT4 1865 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 TRPC5OSA6NMA1 111 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 FAM171A2A8MVW0 826 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 MEI4A8MW99 385 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 KCNU1A8MYU2 1149 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 DFFAO00273 331 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 CASQ2O14958 399 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 BUD23O43709 281 aaKnown RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 ZBTB14O43829 449 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 TADA2AO75478 443 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 SEC24DO94855 1032 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 KLHL18O94889 574 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 PIGNO95427 931 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 AHSGP02765 367 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 PDHA1P08559 390 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 SBK3P0C264 359 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 LINGO3P0C6S8 592 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 C1QTNF9P0C862 333 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 PIM1P11309 404 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 COL6A1P12109 1028 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 TPH1P17752 444 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 TFEBP19484 476 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 SP100P23497 879 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 PIK3R1P27986 724 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 GABRB3P28472 473 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 PPARGP37231 505 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 SLC26A3P40879 764 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 CLCN5P51795 746 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 NDST2P52849 883 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 RABGGTBP53611 331 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 INHBEP58166 350 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 NSUN2Q08J23 767 aaKnown RBP eCLIP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 TBL3Q12788 808 aaKnown RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 CDC16Q13042 620 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 CUL3Q13618 768 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 CCNIQ14094 377 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 ADRM1Q16186 407 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 SLC9B1Q4ZJI4 515 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 ARL13AQ5H913 290 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 VWA5B1Q5TIE3 1220 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 TMEM154Q6P9G4 183 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 SLC41A1Q8IVJ1 513 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 KBTBD2Q8IY47 623 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 DEFB107AQ8IZN7 70 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 CENPLQ8N0S6 344 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 FSTL5Q8N475 847 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 IPMKQ8NFU5 416 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 OR10T2Q8NGX3 314 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 MAPK15Q8TD08 544 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 AJUBAQ96IF1 538 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms