RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 POLR1AO95602 1720 aaPredicted RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 LRRC72A6NJI9 287 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 FAM155AB1AL88 458 aaPredicted RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 EIF1AYO14602 144 aaKnown RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 NKRFO15226 690 aaKnown RBP eCLIP10.99□□□□□ -0.65
MSH6-201ENST00000234420 SLC2A2P11168 524 aaPredicted RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 MECP2P51608 486 aaKnown RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 SMIM11AP58511 58 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 ILF2Q12905 390 aaKnown RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 PARP6Q2NL67 630 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 INAVAQ3KP66 663 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 PLEKHG4Q58EX7 1191 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 MECRQ9BV79 373 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 ABHD16BQ9H3Z7 469 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 FAM149AA5PLN7 773 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 CHST10O43529 356 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 RPS3P23396 243 aaKnown RBP eCLIP10.99□□□□□ -0.655e-7■■■□□ 16.7
MSH6-201ENST00000234420 BST1Q10588 318 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 ELAVL2Q12926 359 aaKnown RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 SLC8B1Q6J4K2 584 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 OR52K1Q8NGK4 314 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 FAM110BQ8TC76 370 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 THAP3Q8WTV1 239 aaPredicted RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 CYB5D2Q8WUJ1 264 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 TMEM125Q96AQ2 219 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 SCLYQ96I15 445 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 MAB21L2Q9Y586 359 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 C9J4A7 227 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 PGAM2P15259 253 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 PVALBP20472 110 aaPredicted RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 ZNF81P51508 661 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 AQP4P55087 323 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 S100A10P60903 97 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 VAMP2P63027 116 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 XKRXQ6PP77 449 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 ZNF571Q7Z3V5 609 aaPredicted RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 GPC2Q8N158 579 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 SPATA6LQ8N4H0 392 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 MGME1Q9BQP7 344 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 PRPF19Q9UMS4 504 aaKnown RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 FKBP7Q9Y680 259 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 GSTT2BP0CG30 244 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 ZNF35P13682 527 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 PEX2P28328 305 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 CXCL9Q07325 125 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 BNIP3Q12983 259 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 UGT8Q16880 541 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 GPR139Q6DWJ6 353 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 HFE2Q6ZVN8 426 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 ZC3HC1Q86WB0 502 aaKnown RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 CREG2Q8IUH2 290 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 TRPM4Q8TD43 1214 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 STARD8Q92502 1023 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 PPP1R14DQ9NXH3 145 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 ZNF226Q9NYT6 803 aa10.99□□□□□ -0.65
MSH6-201ENST00000234420 ZCCHC11Q5TAX3 1644 aaKnown RBP10.99□□□□□ -0.65
MSH6-201ENST00000234420 ILVBLA1L0T0 632 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 FADS2P1A8MWK0 482 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 GATBO75879 557 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 TMEM11P17152 192 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 NRG1Q02297 640 aaPredicted RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 RBM39Q14498 530 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 RNF151Q2KHN1 245 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 ENPP7Q6UWV6 458 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 LINGO4Q6UY18 593 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 CHST9Q7L1S5 443 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 PHTF2Q8N3S3 785 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 MFSD8Q8NHS3 518 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 AGO4Q9HCK5 861 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 LOXHD1Q8IVV2 1947 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 CIB4A0PJX0 185 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 VSTM5A8MXK1 200 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 GPR89AB7ZAQ6 455 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 LINC00032P0C843 101 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 GPR89BP0CG08 455 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 RARAP10276 462 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 AQP1P29972 269 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 PTGES3Q15185 160 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 USP43Q70EL4 1123 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 RAVER1Q8IY67 606 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 ASB2Q96Q27 587 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 C2orf49Q9BVC5 232 aaPredicted RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 RGCCQ9H4X1 137 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 TBC1D13Q9NVG8 400 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 ERVK-18Q9QC07 812 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 ZMYM2Q9UBW7 1377 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 OGTO15294 1046 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 HCN1O60741 890 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 HGFP14210 728 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 AGXTP21549 392 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 SLC12A3P55017 1021 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 PDK4Q16654 411 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 ZNF782Q6ZMW2 699 aaPredicted RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 SNX20Q7Z614 316 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 VTCN1Q7Z7D3 282 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 FARSBQ9NSD9 589 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 COLEC10Q9Y6Z7 277 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 A0A087X1B8 175 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms