RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PEBP4Q96S96 227 aa12.87□□□□□ -0.35
MSH2-201ENST00000233146 SEC22CQ9BRL7 303 aa12.87□□□□□ -0.35
MSH2-201ENST00000233146 TFCP2L1Q9NZI6 479 aa12.87□□□□□ -0.35
MSH2-201ENST00000233146 FIS1Q9Y3D6 152 aa12.87□□□□□ -0.35
MSH2-201ENST00000233146 ACTL7AQ9Y615 435 aa12.87□□□□□ -0.35
MSH2-201ENST00000233146 A0A0J9YYE9 177 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 SLC12A8A0AV02 714 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 NR5A2O00482 541 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 OGTO15294 1046 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 MRPS14O60783 128 aaKnown RBP12.86□□□□□ -0.35
MSH2-201ENST00000233146 PEX14O75381 377 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 CAPN3P20807 821 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 F8A1P23610 371 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 HRH2P25021 359 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 MAP2K6P52564 334 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 SESN2P58004 480 aaPredicted RBP12.86□□□□□ -0.35
MSH2-201ENST00000233146 IRF5Q13568 498 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 VPS26BQ4G0F5 336 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 NOL9Q5SY16 702 aaKnown RBP12.86□□□□□ -0.35
MSH2-201ENST00000233146 ANKRD34AQ69YU3 496 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 LAIR1Q6GTX8 287 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 PAMR1Q6UXH9 720 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 SAMD11Q96NU1 681 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 ITPAQ9BY32 194 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 OSBPL2Q9H1P3 480 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 MORF4L1Q9UBU8 362 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 SPATA31C2B4DYI2 1134 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 RGS10O43665 173 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 C4BPAP04003 597 aaKnown RBP12.86□□□□□ -0.35
MSH2-201ENST00000233146 F7P08709 466 aaPredicted RBP12.86□□□□□ -0.35
MSH2-201ENST00000233146 HOXD8P13378 290 aaPredicted RBP12.86□□□□□ -0.35
MSH2-201ENST00000233146 GADD45AP24522 165 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 CA5AP35218 305 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 TIE1P35590 1138 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 CXCR4P61073 352 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 CLDN10P78369 228 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 ALDH6A1Q02252 535 aaKnown RBP12.86□□□□□ -0.35
MSH2-201ENST00000233146 LIPEQ05469 1076 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 TSTD2Q5T7W7 516 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 IER5Q5VY09 327 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 TDRD10Q5VZ19 366 aaKnown RBP12.86□□□□□ -0.35
MSH2-201ENST00000233146 SLC39A4Q6P5W5 647 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 NLRP8Q86W28 1048 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 CDH26Q8IXH8 852 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 C9orf62Q8N4C0 152 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 KCT2Q8NC54 265 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 TBATAQ96M53 351 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 GPR137Q96N19 417 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 PRDM11Q9NQV5 511 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 MUTYHQ9UIF7 546 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 FBXO10Q9UK96 956 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 TBX20Q9UMR3 447 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 RNF6Q9Y252 685 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 CNTNAP4Q9C0A0 1308 aa12.86□□□□□ -0.35
MSH2-201ENST00000233146 TLL1O43897 1013 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 CYBBP04839 570 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 ALAS2P22557 587 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 CTSKP43235 329 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 NR2C2P49116 596 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 IL5RAQ01344 420 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 SYT16Q17RD7 645 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 HKDC1Q2TB90 917 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 EML3Q32P44 896 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 ALFQ53S48 1182 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 SULT1C3Q6IMI6 304 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 CES3Q6UWW8 571 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 FSTL5Q8N475 847 aaPredicted RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 KBTBD8Q8NFY9 601 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 RIT1Q92963 219 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 FOPNLQ96NB1 174 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 C8orf37Q96NL8 207 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 RBM4BQ9BQ04 359 aaKnown RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 RBM4Q9BWF3 364 aaKnown RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 TRIM54Q9BYV2 358 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 PITHD1Q9GZP4 211 aaPredicted RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 SLC22A4Q9H015 551 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 RNF121Q9H920 327 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 SCN3BQ9NY72 215 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 COPS3Q9UNS2 423 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 STON1Q9Y6Q2 735 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 U3KQV3 271 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 TULP3O75386 442 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 HMGCRP04035 888 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 RAB3AP20336 220 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 YWHAQP27348 245 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 MTHFRP42898 656 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 GLRBP48167 497 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 BCAR1P56945 870 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 ELOAQ14241 798 aaKnown RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 LARP4Q71RC2 724 aaKnown RBP eCLIP12.85□□□□□ -0.35
MSH2-201ENST00000233146 MAP4K3Q8IVH8 894 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 SMG7Q92540 1137 aaKnown RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 AHCYL2Q96HN2 611 aaKnown RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 C12orf57Q99622 126 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 TNFRSF12AQ9NP84 129 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 PIH1D1Q9NWS0 290 aaKnown RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 F8W810 466 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 PAPSS2O95340 614 aaPredicted RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 POLBP06746 335 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 HNRNPLP14866 589 aaKnown RBP eCLIP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms