RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TM4SF4P48230 202 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 ATN1P54259 1190 aaPredicted RBP14.42□□□□□ -0.1
CNOT3-201ENST00000221232 RPL38P63173 70 aaKnown RBP14.42□□□□□ -0.1
CNOT3-201ENST00000221232 PRKG2Q13237 762 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 NCEH1Q6PIU2 408 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 CYP20A1Q6UW02 462 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 OR10Q1Q8NGQ4 319 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 FIG4Q92562 907 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 EBF1Q9UH73 591 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 ZNF711Q9Y462 761 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 FADS3Q9Y5Q0 445 aa14.42□□□□□ -0.1
CNOT3-201ENST00000221232 C1orf232A0A0U1RR37 186 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 KRT87PA6NCN2 255 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 PRMT5O14744 637 aaPredicted RBP14.41□□□□□ -0.1
CNOT3-201ENST00000221232 PQBP1O60828 265 aaKnown RBP14.41□□□□□ -0.1
CNOT3-201ENST00000221232 PRR35P0CG20 571 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 PHKG1Q16816 387 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 LRRC73Q5JTD7 316 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 TXNDC8Q6A555 127 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 TXNDC11Q6PKC3 985 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 TPGS1Q6ZTW0 290 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 ARL14EPQ8N8R7 260 aaPredicted RBP14.41□□□□□ -0.1
CNOT3-201ENST00000221232 FEM1AQ9BSK4 669 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 THUMPD3Q9BV44 507 aaKnown RBP14.41□□□□□ -0.1
CNOT3-201ENST00000221232 TRIM54Q9BYV2 358 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 CLPBQ9H078 707 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 ELOVL2Q9NXB9 296 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 HACD3Q9P035 362 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 IL17CQ9P0M4 197 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 THEGQ9P2T0 379 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 ZFC3H1O60293 1989 aaKnown RBP14.41□□□□□ -0.1
CNOT3-201ENST00000221232 FFAR2O15552 330 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 EEDO75530 441 aaKnown RBP14.41□□□□□ -0.1
CNOT3-201ENST00000221232 PTGER3P43115 390 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 ZXDBP98169 803 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 LAPTM5Q13571 262 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 CDH18Q13634 790 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 OGFOD2Q6N063 350 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 NAT16Q8N8M0 369 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 FBXO30Q8TB52 745 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 KCNJ9Q92806 393 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 C9orf16Q9BUW7 83 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 ETAA1Q9NY74 926 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 KLQ9UEF7 1012 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 VPS51Q9UID3 782 aa14.41□□□□□ -0.1
CNOT3-201ENST00000221232 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-201ENST00000221232 TCRBV5S2A0A599 114 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 DFNA5O60443 496 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 RFC2P35250 354 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 TUFMP49411 452 aaKnown RBP14.4□□□□□ -0.1
CNOT3-201ENST00000221232 C5orf22Q49AR2 442 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 ANKRD34AQ69YU3 496 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.4□□□□□ -0.11e-10■■■■■ 34.7
CNOT3-201ENST00000221232 ARHGAP22Q7Z5H3 698 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 KRTCAP2Q8N6L1 136 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 FAM86B1Q8N7N1 296 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 SKA2Q8WVK7 121 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-201ENST00000221232 CLSTN3Q9BQT9 956 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 VN1R3Q9BXE9 311 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 ACTL8Q9H568 366 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 LATS2Q9NRM7 1088 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 HSFX1Q9UBD0 423 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 LHX3Q9UBR4 397 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 UTS2RQ9UKP6 389 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 RIMKLBQ9ULI2 386 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 CDC14AQ9UNH5 594 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 SLC8A2Q9UPR5 921 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 FAM234BA2RU67 622 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 H0YJX3 145 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 LDLRP01130 860 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 S100BP04271 92 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-201ENST00000221232 ATP6AP1Q15904 470 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 USP41Q3LFD5 358 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 ARMC12Q5T9G4 340 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 SBSNQ6UWP8 590 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 NPAS4Q8IUM7 802 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 DTWD1Q8N5C7 304 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 DHRSXQ8N5I4 330 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 NSMCE2Q96MF7 247 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 FAM8A1Q9UBU6 413 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 CLEC4EQ9ULY5 219 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 DHRS7Q9Y394 339 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 KANSL1LA0AUZ9 987 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 ARVCFO00192 962 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 PRRG1O14668 218 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 KLK8O60259 260 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 ESR1P03372 595 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 STT3AP46977 705 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 NEDD8Q15843 81 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 HID1Q8IV36 788 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 ADGRG2Q8IZP9 1017 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 HS3ST5Q8IZT8 346 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 OR10A6Q8NH74 314 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 TTLL2Q9BWV7 592 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 NUSAP1Q9BXS6 441 aaKnown RBP14.4□□□□□ -0.1
CNOT3-201ENST00000221232 VAPAQ9P0L0 249 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 VPS9D1Q9Y2B5 631 aa14.4□□□□□ -0.1
CNOT3-201ENST00000221232 TAPBPO15533 448 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 CDK4P11802 303 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 EEF1B2P24534 225 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms