RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 SPATS2LQ9NUQ6 558 aaKnown RBP23.21■■□□□ 1.31
HOMER3-201ENST00000221222 NINJ2Q9NZG7 142 aa23.21■■□□□ 1.31
HOMER3-201ENST00000221222 ZFATQ9P243 1243 aa23.21■■□□□ 1.31
HOMER3-201ENST00000221222 GNPTGQ9UJJ9 305 aa23.21■■□□□ 1.31
HOMER3-201ENST00000221222 PCOLCE2Q9UKZ9 415 aa23.21■■□□□ 1.31
HOMER3-201ENST00000221222 SIGLEC6O43699 453 aa23.2■■□□□ 1.3
HOMER3-201ENST00000221222 C1QAP02745 245 aa23.2■■□□□ 1.3
HOMER3-201ENST00000221222 EIF3BP55884 814 aaKnown RBP23.2■■□□□ 1.3
HOMER3-201ENST00000221222 MPP1Q00013 466 aa23.2■■□□□ 1.3
HOMER3-201ENST00000221222 KYNUQ16719 465 aa23.2■■□□□ 1.3
HOMER3-201ENST00000221222 OGFOD3Q6PK18 319 aa23.2■■□□□ 1.3
HOMER3-201ENST00000221222 CCNI2Q6ZMN8 369 aaPredicted RBP23.2■■□□□ 1.3
HOMER3-201ENST00000221222 TBC1D29Q9UFV1 150 aa23.2■■□□□ 1.3
HOMER3-201ENST00000221222 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.2■■□□□ 1.3
HOMER3-201ENST00000221222 DNAJC16Q9Y2G8 782 aa23.2■■□□□ 1.3
HOMER3-201ENST00000221222 CRYL1Q9Y2S2 319 aa23.2■■□□□ 1.3
HOMER3-201ENST00000221222 V9GYY5 206 aaPredicted RBP23.2■■□□□ 1.3
HOMER3-201ENST00000221222 A6NCN8 305 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 FAM159BA6NKW6 160 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 H3BMM5 538 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 FAM153BP0C7A2 387 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 PBLDP30039 288 aaPredicted RBP23.19■■□□□ 1.3
HOMER3-201ENST00000221222 STX2P32856 288 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 FOXC1Q12948 553 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 ERCC6LQ2NKX8 1250 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 FAM153CQ494X1 144 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 CTSL3PQ5NE16 218 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 METRNLQ641Q3 311 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 WDR93Q6P2C0 686 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 XKR5Q6UX68 686 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 WASH2PQ6VEQ5 465 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 SLC26A11Q86WA9 606 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 HM13Q8TCT9 377 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 TSSK1BQ9BXA7 367 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 DPEP2Q9H4A9 486 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 WASH6PQ9NQA3 447 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 SMYD2Q9NRG4 433 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 NSMCE4AQ9NXX6 385 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 SLC17A6Q9P2U8 582 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 GOLGA4Q13439 2230 aaKnown RBP23.19■■□□□ 1.3
HOMER3-201ENST00000221222 USP24Q9UPU5 2620 aa23.19■■□□□ 1.3
HOMER3-201ENST00000221222 HAUS5O94927 633 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 CSRP1P21291 193 aaKnown RBP23.18■■□□□ 1.3
HOMER3-201ENST00000221222 IDSP22304 550 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 GABRB3P28472 473 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 FMO4P31512 558 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 NFE2L1Q14494 772 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 PROX2Q3B8N5 592 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 AGAP9Q5VTM2 703 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 PTRHD1Q6GMV3 140 aaKnown RBP23.18■■□□□ 1.3
HOMER3-201ENST00000221222 FAM83HQ6ZRV2 1179 aaPredicted RBP23.18■■□□□ 1.3
HOMER3-201ENST00000221222 GSPT2Q8IYD1 628 aaKnown RBP23.18■■□□□ 1.3
HOMER3-201ENST00000221222 ZDHHC1Q8WTX9 485 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 CDKL2Q92772 493 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 CAMK1GQ96NX5 476 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 FUT8Q9BYC5 575 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 TXLNGYQ9BZA5 131 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 OSGEPL1Q9H4B0 414 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 NCKIPSDQ9NZQ3 722 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 COMMD10Q9Y6G5 202 aa23.18■■□□□ 1.3
HOMER3-201ENST00000221222 NOBOXO60393 691 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 AHSGP02765 367 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 F7P08709 466 aaPredicted RBP23.17■■□□□ 1.3
HOMER3-201ENST00000221222 F3P13726 295 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 PKMP14618 531 aaKnown RBP23.17■■□□□ 1.3
HOMER3-201ENST00000221222 PHBP35232 272 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 VSNL1P62760 191 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 CNSTQ6PJW8 725 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 C17orf82Q86X59 251 aaPredicted RBP23.17■■□□□ 1.3
HOMER3-201ENST00000221222 ARL10Q8N8L6 244 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 GPR156Q8NFN8 814 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 GLMNQ92990 594 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 APOLD1Q96LR9 279 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 PANX3Q96QZ0 392 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 CDC6Q99741 560 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 COG4Q9H9E3 785 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 ACSL5Q9ULC5 683 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 PCNX2A6NKB5 2137 aa23.17■■□□□ 1.3
HOMER3-201ENST00000221222 LY6G6EA0A0G2JKS1 128 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 IQCF5A8MTL0 148 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 B4DGG1 531 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 LDOC1O95751 146 aaPredicted RBP23.16■■□□□ 1.3
HOMER3-201ENST00000221222 EML2O95834 649 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 SPINK2P20155 84 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 SHC2P98077 582 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 ZNF549Q6P9A3 640 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 ABRAXAS1Q6UWZ7 409 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 TRMT10CQ7L0Y3 403 aaKnown RBP23.16■■□□□ 1.3
HOMER3-201ENST00000221222 SLC35F3Q8IY50 421 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 CFAP206Q8IYR0 622 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 NAGSQ8N159 534 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 LKAAEAR1Q8TD35 194 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 FBF1Q8TES7 1133 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 SLC32A1Q9H598 525 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 PRDM8Q9NQV8 689 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 FTSJ1Q9UET6 329 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 CORO1CQ9ULV4 474 aaPredicted RBP23.16■■□□□ 1.3
HOMER3-201ENST00000221222 PSAT1Q9Y617 370 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 U3KQA8 63 aa23.16■■□□□ 1.3
HOMER3-201ENST00000221222 CXorf49A8MYA2 514 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms