RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 CHRNA6Q15825 494 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 SLC5A9Q2M3M2 681 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 MSS51Q4VC12 460 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 FBXO48Q5FWF7 155 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 ZNF572Q7Z3I7 529 aaPredicted RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 SNX32Q86XE0 403 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 CAPSLQ8WWF8 208 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 ATL1Q8WXF7 558 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 FERD3LQ96RJ6 166 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 TCF12Q99081 682 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 NLNQ9BYT8 704 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 ZDHHC18Q9NUE0 388 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 KCTD5Q9NXV2 234 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 DMTF1Q9Y222 760 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 BRWD1Q9NSI6 2320 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 FAM20BO75063 409 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 PRAMEF12O95522 483 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 SLC2A4P14672 509 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 ALOX12P18054 663 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 JAK1P23458 1154 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 ELAVL3Q14576 367 aaKnown RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 FAM78AQ5JUQ0 283 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 UBE2R2Q712K3 238 aaPredicted RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 TAF8Q7Z7C8 310 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 TXNDC5Q8NBS9 432 aaKnown RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 HLA-CQ95604 372 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 MRPL57Q9BQC6 102 aaKnown RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 GINS4Q9BRT9 223 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 DKK3Q9UBP4 350 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 TMA7Q9Y2S6 64 aaKnown RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 S100A1P23297 94 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 NSG1P42857 185 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 PTGER3P43115 390 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 LIMK2P53671 638 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 SLC7A9P82251 487 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 PON2Q15165 354 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 COL13A1Q5TAT6 717 aaPredicted RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 CPNE9Q8IYJ1 553 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 SCML4Q8N228 414 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 MYLIPQ8WY64 445 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 EZH1Q92800 747 aaPredicted RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 NXNL1Q96CM4 212 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 MTFMTQ96DP5 389 aaKnown RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 C12orf65Q9H3J6 166 aaKnown RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 CAPN10Q9HC96 672 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 TIMMDC1Q9NPL8 285 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 SLC27A6Q9Y2P4 619 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 NME7Q9Y5B8 376 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 NCOR1O75376 2440 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 A0A1W2PP55 124 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 IQCF5A8MTL0 148 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 MRASO14807 208 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 FFAR3O14843 346 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 GPR42O15529 346 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 EPOP01588 193 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 KLKB1P03952 638 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 CDH3P22223 829 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 SLC1A2P43004 574 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 MRPS22P82650 360 aaKnown RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 TOP3AQ13472 1001 aaPredicted RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 MRPL58Q14197 206 aaKnown RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 CPSF6Q16630 551 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 RIPOR1Q6ZS17 1223 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 RTL10Q7L3V2 364 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 ARMCX6Q7L4S7 300 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 FBXW8Q8N3Y1 598 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 DEFB119Q8N690 84 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 MECRQ9BV79 373 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 C6orf203Q9P0P8 240 aaPredicted RBP9.3□□□□□ -0.92
CCDC113-201ENST00000219299 NDOR1Q9UHB4 597 aa9.3□□□□□ -0.92
CCDC113-201ENST00000219299 HHLA1C9JL84 531 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 DCXO43602 365 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 HNRNPLP14866 589 aaKnown RBP eCLIP9.29□□□□□ -0.92
CCDC113-201ENST00000219299 HMGA1P17096 107 aaKnown RBP9.29□□□□□ -0.92
CCDC113-201ENST00000219299 CCT8P50990 548 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 NKX3-2P78367 333 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 EPS8Q12929 822 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 ZNF460Q14592 562 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 CYP2A13Q16696 494 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 PDZK1Q5T2W1 519 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 TRIQKQ629K1 86 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 TANGO2Q6ICL3 276 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 HTR3DQ70Z44 454 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 GIPC3Q8TF64 312 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 SCAMP4Q969E2 229 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 KRCC1Q9NPI7 259 aaPredicted RBP9.29□□□□□ -0.92
CCDC113-201ENST00000219299 KCNE2Q9Y6J6 123 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 GSAPA4D1B5 854 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 FAM25AB3EWG3 89 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 FAM25CB3EWG5 89 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 FAM25GB3EWG6 89 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 ESR1P03372 595 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 ASGR2P07307 311 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 PFKLP17858 780 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 IL4RP24394 825 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 AKT2P31751 481 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 TALDO1P37837 337 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 SOX9P48436 509 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 BST1Q10588 318 aa9.29□□□□□ -0.92
CCDC113-201ENST00000219299 USP4Q13107 963 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms