RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 FAM20CQ8IXL6 584 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 VN1R2Q8NFZ6 395 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 VPS33AQ96AX1 596 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 MTFMTQ96DP5 389 aaKnown RBP9.84□□□□□ -0.83
USP11-201ENST00000218348 MYRFLQ96LU7 910 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 EGFL8Q99944 293 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 RTKNQ9BST9 563 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 HGH1Q9BTY7 390 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 MRPL1Q9BYD6 325 aaKnown RBP9.84□□□□□ -0.83
USP11-201ENST00000218348 EFCAB1Q9HAE3 211 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 ZFYVE1Q9HBF4 777 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 LATS2Q9NRM7 1088 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 ANGPTL2Q9UKU9 493 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 RWDD3Q9Y3V2 267 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 F8W8V4 182 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 AZIN1O14977 448 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 TPST1O60507 370 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 OR4F21O95013 312 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 PPM1AP35813 382 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 HK3P52790 923 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 ZNF648Q5T619 568 aaPredicted RBP9.84□□□□□ -0.83
USP11-201ENST00000218348 PRR23CQ6ZRP0 262 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 Q6ZVU0 165 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 GPSM1Q86YR5 675 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 GRAMD2AQ8IUY3 354 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 SLC22A9Q8IVM8 553 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 ADGRG2Q8IZP9 1017 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 AFAP1L2Q8N4X5 818 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 STAG3L4Q8TBR4 150 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 FUBP1Q96AE4 644 aaKnown RBP9.84□□□□□ -0.83
USP11-201ENST00000218348 TRAPPC9Q96Q05 1148 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 ATOH8Q96SQ7 321 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 MTIF3Q9H2K0 278 aaKnown RBP9.84□□□□□ -0.83
USP11-201ENST00000218348 TUBB1Q9H4B7 451 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 EGFL7Q9UHF1 273 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 CRLS1Q9UJA2 301 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 PIKFYVEQ9Y2I7 2098 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 TMEM265A0A087WTH1 108 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 LEFTY2O00292 366 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 TMED10P49755 219 aaKnown RBP9.84□□□□□ -0.83
USP11-201ENST00000218348 IL2P60568 153 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 TEAD2Q15562 447 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 CHRNA6Q15825 494 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 PRPF38BQ5VTL8 546 aaKnown RBP9.84□□□□□ -0.83
USP11-201ENST00000218348 METTL21CQ5VZV1 264 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 VPS37AQ8NEZ2 397 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 RP9Q8TA86 221 aaKnown RBP9.84□□□□□ -0.83
USP11-201ENST00000218348 GDPD5Q8WTR4 605 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 HACD3Q9P035 362 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 STK39Q9UEW8 545 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 WNT6Q9Y6F9 365 aa9.84□□□□□ -0.83
USP11-201ENST00000218348 NUP210Q8TEM1 1887 aaPredicted RBP9.84□□□□□ -0.83
USP11-201ENST00000218348 CHD5Q8TDI0 1954 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 GIPC1O14908 333 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 SLC25A14O95258 325 aaPredicted RBP9.83□□□□□ -0.84
USP11-201ENST00000218348 ASLP04424 464 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 HLA-FP30511 346 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 CLCN4P51793 760 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 STX1BP61266 288 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 RAB30Q15771 203 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 SFT2D3Q587I9 215 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 RETSATQ6NUM9 610 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 TCEAL8Q8IYN2 117 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 CHST14Q8NCH0 376 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 FAM110BQ8TC76 370 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 CCDC126Q96EE4 140 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 GCNAQ96QF7 691 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 BBS2Q9BXC9 721 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 CLPBQ9H078 707 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 C1orf21Q9H246 121 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 NSUN3Q9H649 340 aaKnown RBP9.83□□□□□ -0.84
USP11-201ENST00000218348 ZNF304Q9HCX3 659 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 ZNHIT2Q9UHR6 403 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 MBD1Q9UIS9 605 aaPredicted RBP9.83□□□□□ -0.84
USP11-201ENST00000218348 CAPN8A6NHC0 703 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 NPIPB15A6NHN6 443 aaPredicted RBP9.83□□□□□ -0.84
USP11-201ENST00000218348 SLCO1B7G3V0H7 640 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 FBP2O00757 339 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 MRASO14807 208 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 ATP6V1C1P21283 382 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 CTNNB1P35222 781 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 HSPA7P48741 367 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 DNAJB13P59910 316 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 PSME3P61289 254 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 HPCAP84074 193 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 PPP2R2DQ66LE6 453 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 ANKS6Q68DC2 871 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 ASTLQ6HA08 431 aaPredicted RBP9.83□□□□□ -0.84
USP11-201ENST00000218348 CHST9Q7L1S5 443 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 ADGRD2Q7Z7M1 963 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 SYVN1Q86TM6 617 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 MRPL43Q8N983 215 aaKnown RBP9.83□□□□□ -0.84
USP11-201ENST00000218348 DTX3Q8N9I9 347 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 CD200R1Q8TD46 325 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 EBF3Q9H4W6 596 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 SYTL2Q9HCH5 934 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 IL26Q9NPH9 171 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 DDX18Q9NVP1 670 aaKnown RBP9.83□□□□□ -0.84
USP11-201ENST00000218348 IL17CQ9P0M4 197 aa9.83□□□□□ -0.84
USP11-201ENST00000218348 LRRC42Q9Y546 428 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms