RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 XKR7Q5GH72 579 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 PLEKHS1Q5SXH7 462 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 NEK10Q6ZWH5 1172 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 HMGCLL1Q8TB92 370 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 UCMAQ8WVF2 138 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 BTN2A2Q8WVV5 523 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 SCAMP4Q969E2 229 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 COQ10AQ96MF6 247 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 EFCAB1Q9HAE3 211 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 CD248Q9HCU0 757 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 UTP6Q9NYH9 597 aaKnown RBP14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 SUN2Q9UH99 717 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 ADAMTS6Q9UKP5 1117 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 G3BP2Q9UN86 482 aaKnown RBP14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 ASB1Q9Y576 335 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 KIAA1549LQ6ZVL6 1849 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 GIPC1O14908 333 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 AREL1O15033 823 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 SLC16A5O15375 505 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 TAPBPO15533 448 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 CHEK2O96017 543 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 C8GP07360 202 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 CD1EP15812 388 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 LBPP18428 481 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 CREB5Q02930 508 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 ELP6Q0PNE2 266 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 HYAL1Q12794 435 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 RUNX3Q13761 415 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 ZNF234Q14588 700 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 PHKG1Q16816 387 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 LDLRAP1Q5SW96 308 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 PDE4DIPQ5VU43 2346 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 RNF165Q6ZSG1 346 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 ZNF765Q7L2R6 523 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 RASGRP3Q8IV61 690 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 DEFB107AQ8IZN7 70 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 NAT14Q8WUY8 206 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 DLG3Q92796 817 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 RHBDF1Q96CC6 855 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 MARK4Q96L34 752 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 KCNA7Q96RP8 456 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 FAM129BQ96TA1 746 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 RIOK2Q9BVS4 552 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 ABCG8Q9H221 673 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 NSUN3Q9H649 340 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 IGFLR1Q9H665 355 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 CD84Q9UIB8 345 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 CDH22Q9UJ99 828 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 SARDHQ9UL12 918 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 COL4A3Q01955 1670 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 PRRC2BQ5JSZ5 2229 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 KPNA3O00505 521 aaPredicted RBP14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 SPINT1O43278 529 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 SGTAO43765 313 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 CRCPO75575 148 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 OTCP00480 354 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 ELFN1P0C7U0 828 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 PRDX3P30048 256 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 GRIK2Q13002 908 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 STX5Q13190 355 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 SP140Q13342 867 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 FASTKQ14296 549 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 RBBP7Q16576 425 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 GOLGA7Q7Z5G4 137 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 SPATA19Q7Z5L4 167 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 DSELQ8IZU8 1212 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 PGAM4Q8N0Y7 254 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 ZNF366Q8N895 744 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 PIP4K2CQ8TBX8 421 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 ARRDC3Q96B67 414 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 CLPTM1LQ96KA5 538 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 GDF15Q99988 308 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 SLC12A9Q9BXP2 914 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 CD244Q9BZW8 370 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 TMEM45AQ9NWC5 275 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 THAP10Q9P2Z0 257 aaPredicted RBP14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 POLG2Q9UHN1 485 aa14.07□□□□□ -0.16
RTFDC1-201ENST00000023939 FADS2P1A8MWK0 482 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 OR7A17O14581 309 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 AIM2O14862 343 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 WNT9AO14904 365 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 FTH1P02794 183 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 ALDOCP09972 364 aaKnown RBP14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 MSH3P20585 1137 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 GPX3P22352 226 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 AKT1P31749 480 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 GJA4P35212 333 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 GCKP35557 465 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 GGT5P36269 586 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 NUDT2P50583 147 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 CCNG1P51959 295 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 MTTPP55157 894 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 ERVPABLB-1P60509 514 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 STX1BP61266 288 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 TBL3Q12788 808 aaKnown RBP14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 GTF2H2Q13888 395 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 GSTA3Q16772 222 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 PREPLQ4J6C6 727 aaPredicted RBP14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 FBXO48Q5FWF7 155 aa14.06□□□□□ -0.16
RTFDC1-201ENST00000023939 ATAT1Q5SQI0 421 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms