RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Arcn1Q5XJY5 511 aaKnown RBP11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kiaa0895Q7TQE7 519 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Aqp12Q8CHJ2 290 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Eipr1Q8K0G5 386 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Nudt4Q8R2U6 179 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr348Q8VGK3 313 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Q91Z58 1206 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lpin3Q99PI4 848 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 4931417E11RikQ9CR05 305 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 S100a14Q9D2Q8 104 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 4930524N10RikQ9D519 233 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vwa7Q9JHA8 891 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rab25Q9WTL2 213 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Smurf2A2A5Z6 748 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm16427J3QN52 483 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ccser2Q3UHI0 833 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lin54Q571G4 749 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Eri2Q5BKS4 688 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Stmnd1Q6P3A1 279 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pcdhb13Q91Y06 796 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Bpifa3Q9D9J8 232 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 DgkeQ9R1C6 564 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mfsd14aP70187 490 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Grik1Q60934 836 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Csgalnact1Q8BJQ9 530 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Samd14Q8K070 417 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Polr1eQ8K202 482 aaKnown RBP11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 As3mtQ91WU5 376 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pdia5Q921X9 517 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr239A0PK55 315 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fam131cA2ADB2 273 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 2010300C02RikE9Q3M9 1175 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm5796E9Q7M8 205 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr55K7N6Q1 315 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm3542K7N6U2 270 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm3629K7N6Y2 205 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm10340K7N708 205 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm3696K7N751 203 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm8281L7N235 204 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn2r2L7N2E9 908 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 OstnP61364 130 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Prickle1Q3U5C7 832 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Samd3Q8C4H2 520 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Map2k7Q8CE90 535 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ppp1r3gQ9CW07 347 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 D3Z070 196 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rdh8D3Z6W3 317 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm4302E9PX25 294 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Prom1O54990 867 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Sh3pxd2aO89032 1124 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ctps2P70303 586 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 MyrflQ3UN70 904 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Nxpe4Q52KP5 543 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Phlda1Q62392 405 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pcdh8Q7TSK3 1070 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slfnl1Q8BHW9 410 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Dupd1Q8BK84 215 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Il33Q8BVZ5 266 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Celf3Q8CIN6 465 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Dnajc5bQ9CQ94 199 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zfp738B8JJX8 793 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn2r17E9PYF5 849 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Aknad1E9Q8N6 675 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm8356J3QPD3 205 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Brms1lQ3U1T3 323 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ccdc177Q3UHB8 706 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cldn11Q60771 207 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Serpinb9dQ8BMT0 377 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Q8BR90 294 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lrrc4cQ8C031 640 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr809Q8VEX8 328 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Glod5Q9D8I3 148 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Spaca1Q9DA48 305 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Syde1Q9DBZ9 737 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr742A2RTP5 311 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zfp949E9Q732 603 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rab11fip2G3XA57 512 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mapk14P47811 360 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 AaasP58742 546 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Apba2P98084 750 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Nxpe2Q3U095 558 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fam46cQ5SSF7 391 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Il1rapQ61730 570 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm16286Q9CQX6 220 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Agpat5Q9D1E8 365 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Snx20Q9D2Y5 313 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ppil2Q9D787 521 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Keap1Q9Z2X8 624 aaKnown RBP11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm281D3Z1Y0 860 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Psen1P49769 467 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Defa14P50712 85 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Igsf9Q05BQ1 1179 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Obox3Q3UT54 335 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Sdr16c5Q7TQA3 309 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Q8CCC3 530 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Usp45Q8K387 813 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc25a3Q8VEM8 357 aaKnown RBP11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pcdhb8Q91XZ2 779 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pcdha8Q91Y12 946 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Bap1Q99PU7 728 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms