RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Uimc1Q5U5Q9 727 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Actr3bQ641P0 418 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Prpf38bQ80SY5 542 aaKnown RBP9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Dnajc16Q80TN4 772 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rhbdf2Q80WQ6 827 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Mrps26Q80ZS3 200 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Slc43a1Q8BSM7 564 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 OsgepQ8BWU5 335 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fem1cQ8CEF1 617 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Olfr183Q8VFB9 309 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Pcdhga9Q91XX9 932 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Lgals2Q9CQW5 130 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gadd45gip1Q9CR59 222 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Exo5Q9CXP9 373 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 5530400C23RikQ9D3I0 173 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fam3aQ9D8T0 230 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Subh2bvQ9D9Z7 123 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tsga13Q9DA17 273 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 KelQ9EQF2 713 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Mapk9Q9WTU6 423 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm4846B2RWH8 538 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cdh19E9Q3A7 770 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Zc3h12bG3X9I7 835 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 SpibO35906 267 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rab23P35288 237 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Opa3Q505D7 179 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Trim24Q64127 1051 aaKnown RBP9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Taf1cQ6PDZ2 836 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Arhgef38Q80VK6 770 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 ToporsQ80Z37 1033 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Amigo1Q80ZD8 492 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Q810N5 247 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Oscp1Q8BHW2 379 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ago3Q8CJF9 860 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Trim61Q8JZK6 461 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Scpep1Q920A5 452 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Mrpl45Q9D0Q7 306 aaKnown RBP9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 4930503E14RikQ9D583 177 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Phf10Q9D8M7 497 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rsc1a1Q9ER99 582 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Mpp5Q9JLB2 675 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Med20Q9R0X0 212 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 NbnQ9R207 751 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fkbp9Q9Z247 570 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Vmn2r103E9PWW0 856 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Herc6F2Z461 1003 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm3642K7N6V4 267 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gstm5P48774 224 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Pdcd1Q02242 288 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cxcr5Q04683 374 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Colec11Q3SXB8 272 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gpsm3Q3U1Z5 159 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ubtfl1Q3USZ2 394 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 1810049J17RikQ3V2G9 153 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Crhr2Q60748 411 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ei24Q61070 340 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Itga7Q61738 1179 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Klhl23Q6GQU2 558 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Pik3c3Q6PF93 887 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Xylt1Q811B1 953 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fzd10Q8BKG4 582 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Serpinb9dQ8BMT0 377 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tmem161aQ8VCA6 480 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Prmt3Q922H1 532 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Dhrs7bQ99J47 323 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Serpinb11Q9CQV3 388 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 2310003L06RikQ9CV82 495 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cnot11Q9CWN7 505 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 2010005H15RikQ9D8D6 97 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 TesminQ9WTJ6 475 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 AccsA2AIG8 502 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fibcd1A2AV25 459 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Xlr5aA2BI45 236 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Eif2b3B1AUN2 452 aaKnown RBP9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Glyatl3E9Q5L8 290 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 2610028H24RikG5E8K1 270 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Pbx3O35317 434 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Pik3cdO35904 1043 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Pdha2P35487 391 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ndst2P52850 883 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Yy2Q3TTC2 378 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fbxw11Q5SRY7 542 aaKnown RBP9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Med22Q62276 200 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Capn3Q64691 821 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rasa4Q6PFQ7 802 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Psd4Q8BLR5 1005 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Adnp2Q8CHC8 1165 aaKnown RBP9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Pih1d2Q8CHR9 315 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ago1Q8CJG1 857 aaKnown RBP9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Q922R1 422 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 DenrQ9CQJ6 198 aaKnown RBP9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ankrd61Q9CQM6 421 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cmtm6Q9CZ69 183 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Q9D4W2 315 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 MecrQ9DCS3 373 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Trbv4A0A075B5I2 113 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Lipo4D3Z608 396 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Kifc5bE9PUA5 672 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Adamts14E9PX39 1209 aa9.81□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Vmn2r35E9Q7U8 861 aa9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms